Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0410
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 5e-19
SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16) 29 4.1
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 29 4.1
SB_34634| Best HMM Match : Baculo_19 (HMM E-Value=7.5) 29 4.1
SB_45219| Best HMM Match : rve (HMM E-Value=3e-14) 28 7.1
SB_34063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_49810| Best HMM Match : VPS9 (HMM E-Value=5.2) 28 9.4
SB_54071| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 28 9.4
SB_9034| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 91.9 bits (218), Expect = 5e-19
Identities = 48/121 (39%), Positives = 70/121 (57%)
Frame = +1
Query: 295 EREALRNMIHQWNANRLDLFALSEPNENLEFHGVMRFYFQDLGQKIATKCXPXXXXXXXX 474
ERE L +I +WNA+RLD+FA+SEP E+LE+ GVMRF+FQD G K+ATKC
Sbjct: 10 EREYLLKLIEEWNASRLDIFAISEPTEDLEYRGVMRFFFQDSGSKVATKCVRISSKDNTD 69
Query: 475 XXXXDTNREIPSDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRMIEKGDSY 654
+ DM+ML+ SYSL+E H + +L+ + P QL ++ ++ +
Sbjct: 70 DVTKILVDKFHPDMKMLTNPSYSLYEVHPNGEAHKLKATDH--PLRIQLEWQLDDREGRF 127
Query: 655 L 657
L
Sbjct: 128 L 128
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 630 DDREGRFLLKCLTNN--EASVIGSDKGDQNFKXKLSKR-REKRIE 755
DDREGRFLLK + A + + +QN K +LSK+ EK+ E
Sbjct: 121 DDREGRFLLKSDQDKIVHAKNLFEGEQNQNLKRRLSKQTNEKKRE 165
>SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16)
Length = 1003
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 238 CRIFVARCPLTAVSVAKIYAILSSNIFKCKHNHFFT 131
C IF + P V +Y +SSN + C+ + FFT
Sbjct: 630 CNIFNSMGPTVLRIVRLVYGSVSSNHWSCRASRFFT 665
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 271 DPADKRMLEREALRNMIHQWNA-NRLDLFALSEPNENLEFHGVMRFYFQDLGQKI 432
D + + + L + I +N N+L F + E+L F G +RFYF+D +K+
Sbjct: 48 DAESEFAVTKRELSDKITAYNKRNQLGAFRILL-KEDLSFDGALRFYFEDGNEKL 101
>SB_34634| Best HMM Match : Baculo_19 (HMM E-Value=7.5)
Length = 151
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 271 DPADKRMLEREALRNMIHQWNA-NRLDLFALSEPNENLEFHGVMRFYFQDLGQKI 432
D + + + L + I +N N+L F + E+L F G +RFYF+D +K+
Sbjct: 48 DAESEFAVTKRELSDKITAYNKRNQLGAFRILL-KEDLSFDGALRFYFEDGNEKL 101
>SB_45219| Best HMM Match : rve (HMM E-Value=3e-14)
Length = 360
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 530 SARTRCGRPTAPTTSASWSRTRKP 601
S + RCG P+ PTT++ R R P
Sbjct: 99 SLKCRCGPPSCPTTTSPAKRRRTP 122
>SB_34063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 328 IGVSCCEALHAPTYACPLGPSCHRISPVF*CRIFVA 221
+GVSC Y C LG SC+ I V CR+ V+
Sbjct: 797 LGVSCYSTRVVLKYPCRLGVSCYSIRVVS-CRVKVS 831
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 706 SPLSDPMTEASLLVRHLSRNLPSLSSAWPVELHEER 599
+PLSD + + +R + +N PS S+ +P +L E++
Sbjct: 524 APLSDAGSPCMMFLREVLQNCPSKSTTYPRKLCEQQ 559
>SB_49810| Best HMM Match : VPS9 (HMM E-Value=5.2)
Length = 280
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = -1
Query: 180 PYYLVTSSNVSTIIFLRNLITKTPEQSLQKLFCNTKLLTTSTSENPLTLITS*SQHNK 7
P +++T + +ST + N + P L + + +T ++TT+ S P ++T HN+
Sbjct: 221 PGFILTQAAISTTVITTNR-SHYPGFILTQAYISTTVITTNRSHYPGFILTQEYFHNR 277
>SB_54071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 545 CGRPTAPTTSASWSRTRKPLLVQLNW 622
C +P S +WSR +PLLVQ W
Sbjct: 20 CDVTGSPPVSITWSRHGEPLLVQGAW 45
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +1
Query: 556 HGPDDERQLEPH----EKAAPRATQLATRMIE 639
HG D E + E H EKAAPRAT AT+ E
Sbjct: 312 HGLDFEAEGELHSLCQEKAAPRATSAATKTRE 343
>SB_9034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1756
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 545 CGRPTAPTTSASWSRTRKPLLVQLNW 622
C +P S +WSR +PLLVQ W
Sbjct: 609 CDVTGSPPVSITWSRHGEPLLVQGAW 634
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,605,854
Number of Sequences: 59808
Number of extensions: 425632
Number of successful extensions: 1355
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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