Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0410
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.        130   2e-30
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...   130   2e-30
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,...   130   2e-30
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,...   130   2e-30
AY089445-1|AAL90183.1|  351|Drosophila melanogaster AT26312p pro...    30   3.9  
AE014296-2815|AAF49402.3|  351|Drosophila melanogaster CG13030-P...    30   3.9  
AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-P...    29   6.8  

>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
          Length = 1893

 Score =  130 bits (315), Expect = 2e-30
 Identities = 73/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +1

Query: 280 DKRMLEREALRNMIHQWNANRLDLFALSEPNENLEFHGVMRFYFQDLGQKIATKCXPXXX 459
           DK+ML+REA+R++I QWNANRLDLFALSEP+ENL FHGVMRFYFQD GQK+ATKC     
Sbjct: 4   DKKMLDREAVRSVIQQWNANRLDLFALSEPDENLLFHGVMRFYFQDAGQKVATKCIRVAS 63

Query: 460 XXXXXXXXXDTNREIPSDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRMIE 639
                        +   DMRMLS+ +Y+L+E H   +ER+L   EK  P   QL   + +
Sbjct: 64  DATVTDVIDTLIEKFRPDMRMLSVPNYALYEVHANGEERRLNADEK--PLLVQLNWHIDD 121

Query: 640 KGDSYLSALLTMKPPS*DPTRETKTS-KXNYPRGEKKELK 756
           +   +L   +  K     P  +T  + K    + EKKE K
Sbjct: 122 REGRFLLKNIDQKT---TPIEQTDLNFKRKLSKREKKEQK 158



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +3

Query: 624 HADDREGRFLLKCLTNNEASVIGSDKGDQNFKXKLSKRREK 746
           H DDREGRFLLK   N +      ++ D NFK KLSKR +K
Sbjct: 118 HIDDREGRFLLK---NIDQKTTPIEQTDLNFKRKLSKREKK 155


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p
           protein.
          Length = 2051

 Score =  130 bits (315), Expect = 2e-30
 Identities = 73/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +1

Query: 280 DKRMLEREALRNMIHQWNANRLDLFALSEPNENLEFHGVMRFYFQDLGQKIATKCXPXXX 459
           DK+ML+REA+R++I QWNANRLDLFALSEP+ENL FHGVMRFYFQD GQK+ATKC     
Sbjct: 4   DKKMLDREAVRSVIQQWNANRLDLFALSEPDENLLFHGVMRFYFQDAGQKVATKCIRVAS 63

Query: 460 XXXXXXXXXDTNREIPSDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRMIE 639
                        +   DMRMLS+ +Y+L+E H   +ER+L   EK  P   QL   + +
Sbjct: 64  DATVTDVIDTLIEKFRPDMRMLSVPNYALYEVHANGEERRLNADEK--PLLVQLNWHIDD 121

Query: 640 KGDSYLSALLTMKPPS*DPTRETKTS-KXNYPRGEKKELK 756
           +   +L   +  K     P  +T  + K    + EKKE K
Sbjct: 122 REGRFLLKNIDQKT---TPIEQTDLNFKRKLSKREKKEQK 158



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +3

Query: 624 HADDREGRFLLKCLTNNEASVIGSDKGDQNFKXKLSKRREK 746
           H DDREGRFLLK   N +      ++ D NFK KLSKR +K
Sbjct: 118 HIDDREGRFLLK---NIDQKTTPIEQTDLNFKRKLSKREKK 155


>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
           isoform A protein.
          Length = 2051

 Score =  130 bits (315), Expect = 2e-30
 Identities = 73/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +1

Query: 280 DKRMLEREALRNMIHQWNANRLDLFALSEPNENLEFHGVMRFYFQDLGQKIATKCXPXXX 459
           DK+ML+REA+R++I QWNANRLDLFALSEP+ENL FHGVMRFYFQD GQK+ATKC     
Sbjct: 4   DKKMLDREAVRSVIQQWNANRLDLFALSEPDENLLFHGVMRFYFQDAGQKVATKCIRVAS 63

Query: 460 XXXXXXXXXDTNREIPSDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRMIE 639
                        +   DMRMLS+ +Y+L+E H   +ER+L   EK  P   QL   + +
Sbjct: 64  DATVTDVIDTLIEKFRPDMRMLSVPNYALYEVHANGEERRLNADEK--PLLVQLNWHIDD 121

Query: 640 KGDSYLSALLTMKPPS*DPTRETKTS-KXNYPRGEKKELK 756
           +   +L   +  K     P  +T  + K    + EKKE K
Sbjct: 122 REGRFLLKNIDQKT---TPIEQTDLNFKRKLSKREKKEQK 158



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +3

Query: 624 HADDREGRFLLKCLTNNEASVIGSDKGDQNFKXKLSKRREK 746
           H DDREGRFLLK   N +      ++ D NFK KLSKR +K
Sbjct: 118 HIDDREGRFLLK---NIDQKTTPIEQTDLNFKRKLSKREKK 155


>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
           isoform B protein.
          Length = 1882

 Score =  130 bits (315), Expect = 2e-30
 Identities = 73/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +1

Query: 280 DKRMLEREALRNMIHQWNANRLDLFALSEPNENLEFHGVMRFYFQDLGQKIATKCXPXXX 459
           DK+ML+REA+R++I QWNANRLDLFALSEP+ENL FHGVMRFYFQD GQK+ATKC     
Sbjct: 4   DKKMLDREAVRSVIQQWNANRLDLFALSEPDENLLFHGVMRFYFQDAGQKVATKCIRVAS 63

Query: 460 XXXXXXXXXDTNREIPSDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRMIE 639
                        +   DMRMLS+ +Y+L+E H   +ER+L   EK  P   QL   + +
Sbjct: 64  DATVTDVIDTLIEKFRPDMRMLSVPNYALYEVHANGEERRLNADEK--PLLVQLNWHIDD 121

Query: 640 KGDSYLSALLTMKPPS*DPTRETKTS-KXNYPRGEKKELK 756
           +   +L   +  K     P  +T  + K    + EKKE K
Sbjct: 122 REGRFLLKNIDQKT---TPIEQTDLNFKRKLSKREKKEQK 158



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +3

Query: 624 HADDREGRFLLKCLTNNEASVIGSDKGDQNFKXKLSKRREK 746
           H DDREGRFLLK   N +      ++ D NFK KLSKR +K
Sbjct: 118 HIDDREGRFLLK---NIDQKTTPIEQTDLNFKRKLSKREKK 155


>AY089445-1|AAL90183.1|  351|Drosophila melanogaster AT26312p
           protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
 Frame = -3

Query: 316 CCEALHAPTYACPLGPSCHRISPVF*CRIFVARCPLTAVSVAKIYA-----ILSSNIFKC 152
           C   +  P   CP G   H I     CR  +  CP+  V +  I +     + S  IF C
Sbjct: 109 CFGYIMPPIMQCPRG---HLICST--CRSKLTICPVCRVFMTNIRSLAMEKVASKLIFPC 163

Query: 151 KHNHF 137
           KH+HF
Sbjct: 164 KHSHF 168


>AE014296-2815|AAF49402.3|  351|Drosophila melanogaster CG13030-PA
           protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
 Frame = -3

Query: 316 CCEALHAPTYACPLGPSCHRISPVF*CRIFVARCPLTAVSVAKIYA-----ILSSNIFKC 152
           C   +  P   CP G   H I     CR  +  CP+  V +  I +     + S  IF C
Sbjct: 109 CFGYIMPPIMQCPRG---HLICST--CRSKLTICPVCRVFMTNIRSLAMEKVASKLIFPC 163

Query: 151 KHNHF 137
           KH+HF
Sbjct: 164 KHSHF 168


>AE014298-2077|AAF48404.1|  633|Drosophila melanogaster CG12398-PA
           protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 417 ILEVETHHTVELQILIGFAEREQIEPVGVPLVYHV 313
           IL   +  + +L ++ G   R+Q+EP G+P+V H+
Sbjct: 310 ILSAGSLASPQLLMVSGVGPRDQLEPQGIPVVQHL 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,923,417
Number of Sequences: 53049
Number of extensions: 618236
Number of successful extensions: 2096
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)