Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0409
(853 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41091 Cluster: Eukaryotic translation initiation facto... 158 1e-37
UniRef50_UPI0000D9AD7A Cluster: PREDICTED: similar to eukaryotic... 149 9e-35
UniRef50_Q09130 Cluster: Eukaryotic translation initiation facto... 140 4e-32
UniRef50_Q1PF44 Cluster: Eukaryotic translation initiation facto... 131 2e-29
UniRef50_Q7QZ18 Cluster: GLP_464_49314_47878; n=2; Giardia intes... 105 1e-21
UniRef50_Q4QHR7 Cluster: Eukaryotic translation initiation facto... 96 1e-18
UniRef50_Q8TJT7 Cluster: Translation initiation factor 2 subunit... 89 1e-16
UniRef50_A4YIX9 Cluster: Protein synthesis factor, GTP-binding; ... 80 8e-14
UniRef50_Q98RT0 Cluster: Eukaryotic translation initiation facto... 77 6e-13
UniRef50_Q8ZZV4 Cluster: Translation initiation factor aIF-2 gam... 76 1e-12
UniRef50_Q74NG5 Cluster: NEQ270; n=1; Nanoarchaeum equitans|Rep:... 65 2e-09
UniRef50_Q4QHR6 Cluster: Translation initiation factor eif-2b ga... 65 2e-09
UniRef50_P33887 Cluster: Eukaryotic translation initiation facto... 62 1e-08
UniRef50_Q8TYZ3 Cluster: GTPase-translation elongation factor; n... 60 5e-08
UniRef50_O36041 Cluster: Eukaryotic translation initiation facto... 59 1e-07
UniRef50_Q46497 Cluster: Selenocysteine-specific elongation fact... 44 0.005
UniRef50_P57772 Cluster: Selenocysteine-specific elongation fact... 42 0.020
UniRef50_A0LHL0 Cluster: Selenocysteine-specific translation elo... 41 0.034
UniRef50_O59411 Cluster: Putative uncharacterized protein PH1707... 41 0.034
UniRef50_Q9JHW4 Cluster: Selenocysteine-specific elongation fact... 41 0.046
UniRef50_Q3E0L1 Cluster: Translation elongation factor, selenocy... 40 0.079
UniRef50_Q057R5 Cluster: GTP-binding protein; n=1; Buchnera aphi... 39 0.18
UniRef50_Q46455 Cluster: Selenocysteine-specific elongation fact... 39 0.18
UniRef50_Q2LU53 Cluster: Selenocysteine-specific protein transla... 37 0.74
UniRef50_Q8VZ74 Cluster: GTP-binding protein-like; n=9; Magnolio... 37 0.74
UniRef50_A6BIM9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.98
UniRef50_Q0HJL8 Cluster: Carboxyl-terminal protease precursor; n... 36 1.7
UniRef50_Q98218 Cluster: Nucleoside triphosphatase II; n=7; Chor... 36 1.7
UniRef50_Q7ZVX1 Cluster: Solute carrier family 9 (Sodium/hydroge... 35 2.3
UniRef50_A7IGX4 Cluster: Signal transduction histidine kinase; n... 34 4.0
UniRef50_Q3LVV5 Cluster: Eukaryotic translation initiation facto... 34 4.0
UniRef50_Q2UPX8 Cluster: Predicted protein; n=5; Trichocomaceae|... 34 4.0
UniRef50_Q75CE1 Cluster: Dihydroorotate dehydrogenase, mitochond... 34 5.2
UniRef50_A6P2V2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q54JN5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A0BTU2 Cluster: Chromosome undetermined scaffold_128, w... 33 6.9
UniRef50_Q6NY07 Cluster: Eif2s3x protein; n=2; Euteleostomi|Rep:... 33 9.1
UniRef50_Q1JYY0 Cluster: Selenocysteine-specific translation elo... 33 9.1
UniRef50_Q22UJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_Q6BWV6 Cluster: Similar to sp|Q04080 Saccharomyces cere... 33 9.1
UniRef50_A5DAS0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
>UniRef50_P41091 Cluster: Eukaryotic translation initiation factor 2
subunit 3; n=129; Eukaryota|Rep: Eukaryotic translation
initiation factor 2 subunit 3 - Homo sapiens (Human)
Length = 472
Score = 158 bits (384), Expect = 1e-37
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG EIEVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 324
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 325 HNDLQYAAPGGLIGVGTKIDPTLCR 349
Score = 155 bits (376), Expect = 1e-36
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+IVIRSFDV
Sbjct: 241 KKIPVPPRDFTSEPRLIVIRSFDV 264
Score = 144 bits (349), Expect = 2e-33
Identities = 75/101 (74%), Positives = 83/101 (82%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQVLGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+VNIG
Sbjct: 350 ADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG 409
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
SLSTGGRV A K D G K TNP CT +GEK SRRVE
Sbjct: 410 SLSTGGRVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 448
>UniRef50_UPI0000D9AD7A Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 2, subunit 3 gamma, 52kDa
isoform 1; n=1; Macaca mulatta|Rep: PREDICTED: similar
to eukaryotic translation initiation factor 2, subunit 3
gamma, 52kDa isoform 1 - Macaca mulatta
Length = 380
Score = 149 bits (361), Expect = 9e-35
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ++QI+ FVQGTVAEGAPI+PISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKESQAKEQYKQILAFVQGTVAEGAPIMPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPV RDFTS PR+IVIRSFDV
Sbjct: 241 KKIPVSPRDFTSEPRLIVIRSFDV 264
Score = 72.5 bits (170), Expect = 1e-11
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIE---VRPGLVSKDADGKLTCRPIFSRIVSL 424
NKPGCEVDDL+GGVAGGSIL+GVL VG EIE + P +V +++ + ++ + S+
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQEIEDLVLFPKIVRENSCVNQSFPKLYHFLQSI 324
Query: 425 FAEQNELQYAVPGGLIGVGTKIEPTLCRLIDLWDKY*EQLDVYREFLSNSKYLI 586
N L AV L+ + K+ P L + W KY Q ++Y + N K+ I
Sbjct: 325 MI-CNMLLQAV---LLELEQKLTPLCAGLTEWWGKYLVQSELYLRYSQNWKFPI 374
>UniRef50_Q09130 Cluster: Eukaryotic translation initiation factor 2
subunit gamma; n=47; Eukaryota|Rep: Eukaryotic
translation initiation factor 2 subunit gamma -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 140 bits (339), Expect = 4e-32
Identities = 62/85 (72%), Positives = 75/85 (88%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPG EVDDL+GGVAGGSIL GVL + EIE+RPG+V+KD DG++ C+PIFSRI+SLFAE
Sbjct: 245 NKPGAEVDDLKGGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAE 304
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+L+ AVPGGLIGVGT ++PTLCR
Sbjct: 305 HNDLKIAVPGGLIGVGTTVDPTLCR 329
Score = 131 bits (317), Expect = 2e-29
Identities = 56/84 (66%), Positives = 75/84 (89%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
+LKHI+ILQNK+DL++E A+E ++ I+KF++GTVAE +PI+PISAQLKYNI+ + EYI
Sbjct: 161 QLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIV 220
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIP+P+RDFT+ PR+IVIRSFDV
Sbjct: 221 KKIPIPVRDFTTAPRLIVIRSFDV 244
Score = 115 bits (277), Expect = 1e-24
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DRLVGQVLG+ G LP ++ +LE++Y+LL+RLLGV++ GDK KVQKL KNEVL+VNIG
Sbjct: 330 ADRLVGQVLGSKGNLPEVYTELEINYFLLRRLLGVKS-GDKNTTKVQKLAKNEVLMVNIG 388
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
S STGGRV+ K D K T P CT IGEK SRR+E
Sbjct: 389 STSTGGRVMMVKADMA-KILLTAPACTEIGEKV-ALSRRIE 427
>UniRef50_Q1PF44 Cluster: Eukaryotic translation initiation factor 2
subunit 3/eIF2S3/eIF-2- gamma; n=1; Arabidopsis
thaliana|Rep: Eukaryotic translation initiation factor 2
subunit 3/eIF2S3/eIF-2- gamma - Arabidopsis thaliana
(Mouse-ear cress)
Length = 436
Score = 131 bits (316), Expect = 2e-29
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIP 194
+LI+QNKIDL++E +A +QHE I +F+ T AEGAPI+P+SAQLKYNI+VLCEYI KKIP
Sbjct: 147 LLIIQNKIDLIQENEAIKQHEDIQRFITNTNAEGAPIVPVSAQLKYNIDVLCEYIVKKIP 206
Query: 195 VPLRDFTSPPRMIVIRSFDV 254
+P+RDF SPPRMIVIRSFDV
Sbjct: 207 LPVRDFVSPPRMIVIRSFDV 226
Score = 126 bits (303), Expect = 9e-28
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPG + D ++GGVAGGSILQGVL VG IE+RPG+ KD +G C PI++RI SL+AE
Sbjct: 227 NKPGSDYDGMKGGVAGGSILQGVLKVGHIIEIRPGITRKDENGDTKCTPIYTRITSLYAE 286
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
QNELQ+AVPGGLIG+GT ++PTL R
Sbjct: 287 QNELQFAVPGGLIGIGTSMDPTLTR 311
Score = 103 bits (248), Expect = 4e-21
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = +1
Query: 511 DRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIGS 690
DRLVGQVLG +G LP ++V+LEVS+ LL RL+GV+T+ ++ +V KLVK E+L++NIGS
Sbjct: 313 DRLVGQVLGEIGTLPDVYVELEVSFQLLTRLIGVKTKETERQMRVSKLVKGEILMLNIGS 372
Query: 691 LSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
+STG VI K D K T P CT IGEK SRRV+
Sbjct: 373 MSTGAMVIGVKKDMV-KVNLTLPVCTSIGEKV-AISRRVD 410
>UniRef50_Q7QZ18 Cluster: GLP_464_49314_47878; n=2; Giardia
intestinalis|Rep: GLP_464_49314_47878 - Giardia lamblia
ATCC 50803
Length = 478
Score = 105 bits (253), Expect = 1e-21
Identities = 48/110 (43%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Frame = +2
Query: 182 KKDSRTPKGFHIASSYDCYSFIRCNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGL 361
K+D P F + S+D NKPG ++D++RGGVAGG++LQG+ +G +E+RPG
Sbjct: 245 KRDLTLPPLFMVIRSFDV------NKPGYDIDNIRGGVAGGTLLQGMFKLGDTVEIRPGY 298
Query: 362 -VSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIEPTLCR 508
+ + GK +C P+ ++I+S+ A++NEL+YA+PGGLI +GT I+P+ R
Sbjct: 299 TIMNEKTGKCSCYPLITKIISIKADENELRYAIPGGLIAIGTFIDPSYTR 348
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAP-IIPISAQLKYNIEVLCEYI 179
K ++I+QNKIDL+KE +AK H+QIV ++ ++ P IIP SA YN++++ +I
Sbjct: 178 KADRVIIVQNKIDLIKEQEAKSHHQQIVNYLNISLKTKNPHIIPTSAVSGYNVDLVLHHI 237
Query: 180 TKKIPVPLRDFTSPPRMIVIRSFDV 254
K+P+P RD T PP +VIRSFDV
Sbjct: 238 VNKLPIPKRDLTLPPLFMVIRSFDV 262
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 511 DRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIGS 690
DRLVG V+G G +P I + + + Y L+ +L+ + K+ L NEV+L IGS
Sbjct: 350 DRLVGSVIGYPGHMPPIRLNITIYYELMHQLISAVNTNN---TKIAVLAVNEVILFTIGS 406
Query: 691 LSTGGRVIATKVDFG*KS----PFTNPCCTGIGEK 783
S G + A + G + P C GE+
Sbjct: 407 NSVSGTIKAVRTVNGVEKIADVVMNKPICAKTGEQ 441
>UniRef50_Q4QHR7 Cluster: Eukaryotic translation initiation factor 2
subunit, putative; n=5; Trypanosomatidae|Rep: Eukaryotic
translation initiation factor 2 subunit, putative -
Leishmania major
Length = 479
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 NKPG-CEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLV----SKDADGKLTCRPIFSRIV 418
NKPG +++ L+GGVAGG++ QGV+ VG +E+RPGLV S + + T P+ +R V
Sbjct: 267 NKPGEGDIESLKGGVAGGTVTQGVIKVGQVVEIRPGLVRSRSSNEQGSRFTYSPLKTRTV 326
Query: 419 SLFAEQNELQYAVPGGLIGVGTKIEPTLCR 508
+L AE N LQYA+PGGLI VGT ++PTL R
Sbjct: 327 TLKAENNVLQYAIPGGLIAVGTTLDPTLTR 356
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KL+H+++LQNKIDLV E +A +Q+ + ++ +A PI+PISAQLK N++ L EY+
Sbjct: 185 KLRHLVVLQNKIDLVGEVKAHDQYRHVRAYLD-NIALNVPIVPISAQLKRNVDYLLEYLL 243
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
IP+P+R +P RM V+RSFD+
Sbjct: 244 -HIPMPVRQLKAPVRMTVVRSFDI 266
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 511 DRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAK-VQKLVKNEVLLVNIG 687
D++VG +LG G LP ++ ++EV YYL ++G +++ K AK VQKL E L +N+G
Sbjct: 358 DKMVGNMLGEEGTLPEVYCEIEVQYYLFSEMVGAKSKDGKSTAKRVQKLNVLESLQINVG 417
Query: 688 SLSTGGRVI-ATKVDFG*KSPFTNPCCTGIGEK 783
+L+ G V+ T+ K P C GE+
Sbjct: 418 TLTAGATVLNITQDPEIAKLELVTPVCCSTGEQ 450
>UniRef50_Q8TJT7 Cluster: Translation initiation factor 2 subunit
gamma; n=48; Archaea|Rep: Translation initiation factor
2 subunit gamma - Methanosarcina acetivorans
Length = 443
Score = 89.4 bits (212), Expect = 1e-16
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = +3
Query: 6 LKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
+K+I+I+QNKIDLV + E + QI +FV+GTVAE APIIPISAQ NI+VL + +
Sbjct: 170 IKNIVIVQNKIDLVSREKLVENYHQIKEFVKGTVAENAPIIPISAQQNINIDVLIDALET 229
Query: 186 KIPVPLRDFTSPPRMIVIRSFDV 254
+IP P+ P M++ RSFD+
Sbjct: 230 QIPTPVHKVDKPASMLIARSFDI 252
Score = 83.4 bits (197), Expect = 7e-15
Identities = 42/103 (40%), Positives = 63/103 (61%)
Frame = +2
Query: 200 PKGFHIASSYDCYSFIRCNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDAD 379
P IA S+D NKPG +D++RGGV GG++ +GVL G E+E+RPG + +
Sbjct: 241 PASMLIARSFDI------NKPGASIDEIRGGVIGGTLTEGVLHPGDELEIRPG-IKVTTE 293
Query: 380 GKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIEPTLCR 508
G PI + I S++A +++ A PGGL+ VGT ++PTL +
Sbjct: 294 GSTKWIPIVTTISSIYAGPTKVEEATPGGLLAVGTYLDPTLTK 336
>UniRef50_A4YIX9 Cluster: Protein synthesis factor, GTP-binding;
n=1; Metallosphaera sedula DSM 5348|Rep: Protein
synthesis factor, GTP-binding - Metallosphaera sedula
DSM 5348
Length = 415
Score = 79.8 bits (188), Expect = 8e-14
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPG +L+GGV GGSI+QG+ V EI+V PG + + GK+T +P+++R+ SL
Sbjct: 224 NKPGTPSTELKGGVVGGSIIQGMFKVDQEIKVLPG-IRLEEKGKITYKPLYTRVSSLRFG 282
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
E Q A PGGL+ +GT ++P++ +
Sbjct: 283 DLEFQEARPGGLVAMGTYLDPSITK 307
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 6 LKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
+ ++I+QNK+D+V + A Q QI +F++ T A A IIP+SA K NI+ L E + +
Sbjct: 141 INKLIIVQNKVDVVSKDAALAQFNQIKEFIKDTWASEAEIIPVSALHKINIDALIEALER 200
Query: 186 KIPVPLRDFTSPPRMIVIRSFDV 254
+IP P RD + P M+VIRSFDV
Sbjct: 201 RIPTPKRDMSLDPIMLVIRSFDV 223
>UniRef50_Q98RT0 Cluster: Eukaryotic translation initiation factor
gamma SU; n=2; Eukaryota|Rep: Eukaryotic translation
initiation factor gamma SU - Guillardia theta
(Cryptomonas phi)
Length = 491
Score = 77.0 bits (181), Expect = 6e-13
Identities = 39/114 (34%), Positives = 63/114 (55%)
Frame = +2
Query: 167 LRVYNKKDSRTPKGFHIASSYDCYSFIRCNKPGCEVDDLRGGVAGGSILQGVLTVGMEIE 346
L++ +K P+ F ++ NKPG + DLRGGV GGSI++G++ + E
Sbjct: 262 LQLIAEKFIEFPRSFGLSPLVFILRSFDVNKPGTNIKDLRGGVVGGSIVKGMIKLNQFFE 321
Query: 347 VRPGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIEPTLCR 508
+RPG+ K K+ C + +I ++ E L A GGLIG+GT ++P+L +
Sbjct: 322 IRPGIFFK-RKNKILCNFLHIQIKTINVENRNLPEATCGGLIGIGTNLDPSLTK 374
Score = 62.9 bits (146), Expect = 1e-08
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
+L +++I+QNKID+V QA + QI K + + IIP+SAQ K N++VL + I
Sbjct: 207 ELSNLIIIQNKIDIVSTTQAFRNYFQIQKLCESIKLKNFSIIPLSAQKKINMDVLLQLIA 266
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
+K R F P + ++RSFDV
Sbjct: 267 EKFIEFPRSFGLSPLVFILRSFDV 290
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Frame = +1
Query: 493 TNAVPS----DRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVK 660
TN PS D+L GQ++G LP I K+ ++Y LLKRLL + K + K +
Sbjct: 366 TNLDPSLTKGDKLSGQMMGKSESLPPIVSKILINYRLLKRLLFL----SKDSIKSVGIKL 421
Query: 661 NEVLLVNIGSLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVEN 813
E++++ + + ST G++ + K + P C +K SRR+ N
Sbjct: 422 GEIIMITVNNSSTSGKIYSKKKN-NVSIELIKPICCNFSDKV-CISRRINN 470
>UniRef50_Q8ZZV4 Cluster: Translation initiation factor aIF-2 gamma
subunit, putative; n=5; Thermoproteaceae|Rep:
Translation initiation factor aIF-2 gamma subunit,
putative - Pyrobaculum aerophilum
Length = 411
Score = 76.2 bits (179), Expect = 1e-12
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGL-VSKDADGKLTCRPIFSRIVSLFA 430
N PG D LRGGV GG++L+GVL VG EIE+RPGL V K G +PI+++++S+
Sbjct: 220 NPPGTAPDKLRGGVLGGTLLRGVLRVGDEIELRPGLKVDKPKPG---YQPIYTKVLSIEY 276
Query: 431 EQNELQYAVPGGLIGVGTKIEPTLCR 508
+++ A PGGL+G+ T ++P L +
Sbjct: 277 SGQKVEEARPGGLVGIMTGLDPALTK 302
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 6 LKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
++H+++ QNKIDLV + +A E +EQI F++GT AE A ++PISA + NI+ L Y+ K
Sbjct: 137 VRHMVVAQNKIDLVTKEKALENYEQIKNFLKGTWAEKAKVVPISALHRVNIDALVTYLAK 196
Query: 186 KIPVPLRDFTSPPRMIVIRSFDV 254
+IP + P V+RSF+V
Sbjct: 197 EIPKREAELGKPALFSVLRSFNV 219
>UniRef50_Q74NG5 Cluster: NEQ270; n=1; Nanoarchaeum equitans|Rep:
NEQ270 - Nanoarchaeum equitans
Length = 396
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +3
Query: 6 LKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
+KH ++ QNKIDLV + QA + +E+I K + IIPISA NI+ L Y+T
Sbjct: 130 IKHFIVAQNKIDLVTKEQAIKNYEEIKKLID------TYIIPISAIHNVNIDALLYYLT- 182
Query: 186 KIPVPLRDFTSPPRMIVIRSFDV 254
KIP+P ++ P M+V RSFDV
Sbjct: 183 KIPLPKKEENKDPLMVVARSFDV 205
Score = 62.9 bits (146), Expect = 1e-08
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPG + L GGV GGS+ QG L VG EIE+RPG+ ++ +PI++ I S+
Sbjct: 206 NKPGTDPKKLVGGVLGGSLKQGKLKVGDEIEIRPGIKIEN-----KWQPIYTEITSIRQG 260
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
+ A+P G + +GT ++P L R
Sbjct: 261 NYFVDTALPRGTLAIGTTLDPFLTR 285
Score = 33.1 bits (72), Expect = 9.1
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +1
Query: 511 DRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIGS 690
D L GQV+G LP ++ K+E+ Y L ++ +G TE KV K + LLV S
Sbjct: 287 DNLAGQVVGYPDKLPPMWDKIEIEYSLFEKAVG--TE-----EKVNPPKKGDKLLVGGLS 339
Query: 691 LSTGGRVIATKVD 729
+ + VI +K D
Sbjct: 340 IISPALVIESKKD 352
>UniRef50_Q4QHR6 Cluster: Translation initiation factor eif-2b gamma
subunit, putative; n=4; Leishmania|Rep: Translation
initiation factor eif-2b gamma subunit, putative -
Leishmania major
Length = 601
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 24/100 (24%)
Frame = +2
Query: 281 LRGGVAGGSILQGVLTVGMEIEVRPGL------------------------VSKDADGKL 388
L+GGV GG++ GVL VG EIE+ PGL V+ G+L
Sbjct: 281 LKGGVIGGTVAAGVLCVGDEIEIIPGLLVLRRRDGVLPRRADVLSGRELAYVASPPPGEL 340
Query: 389 TCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIEPTLCR 508
P+ + +V L AE+NELQ+AVPGGLI +GT ++P+L R
Sbjct: 341 YAVPLRTTVVRLQAEKNELQFAVPGGLIAIGTTLDPSLTR 380
Score = 57.2 bits (132), Expect = 5e-07
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEG-APIIPISAQLKYNIEVLCEYITKKI 191
+++LQNK+DLV + +A Q+ I ++ A AP+IPI AQ NI L +Y+ I
Sbjct: 189 LIVLQNKVDLVSKERAAAQYSIIHHYLATKTAYAKAPVIPICAQQHANISFLLDYLV-HI 247
Query: 192 PVPLRDFTSPPRMIVIRSFDV 254
P+P R M V+RSFDV
Sbjct: 248 PLPRRQLHHAQYMNVLRSFDV 268
>UniRef50_P33887 Cluster: Eukaryotic translation initiation factor 2
subunit 3; n=1; Oryctolagus cuniculus|Rep: Eukaryotic
translation initiation factor 2 subunit 3 - Oryctolagus
cuniculus (Rabbit)
Length = 152
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPI 125
KLKHILIL NKIDLVKE QAKEQ+ QI+ FVQ TVA GA +
Sbjct: 42 KLKHILILGNKIDLVKESQAKEQYGQILAFVQETVAXGATV 82
Score = 46.0 bits (104), Expect(2) = 3e-07
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 664 EVLLVNIGSLSTGGRVIATKVDFG*KSPFTNPCCTGIGEK 783
E+ +VNIGSLSTGG+V A K D G K TNP T +GE+
Sbjct: 98 ELXIVNIGSLSTGGQVSAVKADLG-KIVLTNPVXTEVGEE 136
Score = 31.9 bits (69), Expect(2) = 3e-07
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 520 VGQVLGAVGCLPGIFVKLEV 579
VGQVLGAVG LP IF +L +
Sbjct: 82 VGQVLGAVGALPEIFTELXI 101
>UniRef50_Q8TYZ3 Cluster: GTPase-translation elongation factor; n=1;
Methanopyrus kandleri|Rep: GTPase-translation elongation
factor - Methanopyrus kandleri
Length = 459
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +3
Query: 18 LILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPV 197
+I NK+DLV E + + E+I + +QGT E APIIP+SA++ IE L + + + +
Sbjct: 114 VIALNKVDLVDEKTVERRIEEIKRVLQGTTLEDAPIIPVSAKIGEGIEDLKDALLEVLEP 173
Query: 198 PLRDFTSPPRMIVIRSFDV 254
P RD SP RM + +F V
Sbjct: 174 PNRDLDSPFRMPIDHAFHV 192
>UniRef50_O36041 Cluster: Eukaryotic translation initiation factor 2
subunit gamma; n=1; Spironucleus vortens|Rep: Eukaryotic
translation initiation factor 2 subunit gamma -
Spironucleus vortens
Length = 210
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +3
Query: 9 KHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKK 188
K I+I QNKIDLV E QA+ +++I FV G ++PISA NI+ + +++ +
Sbjct: 134 KKIIIAQNKIDLVTEQQAQNNYQEIQAFVHG--ISDINVVPISAIQNLNIDYILKHLVET 191
Query: 189 IPVPLRDFTSPPRMIVIRS 245
I P R+ + PR +IRS
Sbjct: 192 ITPPRRNLKAHPRFTIIRS 210
>UniRef50_Q46497 Cluster: Selenocysteine-specific elongation factor;
n=4; Desulfovibrionales|Rep: Selenocysteine-specific
elongation factor - Desulfovibrio baculatus
(Desulfomicrobium baculatus)
Length = 634
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 18 LILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
L+ K D+V+E + HE++ ++ G+ EGAPI+P+SA +E L YI +
Sbjct: 110 LVALTKTDMVEEDWLELVHEEVQTYLAGSFLEGAPIVPVSAHTGAGLEELKGYIAE 165
>UniRef50_P57772 Cluster: Selenocysteine-specific elongation factor;
n=14; Deuterostomia|Rep: Selenocysteine-specific
elongation factor - Homo sapiens (Human)
Length = 596
Score = 41.9 bits (94), Expect = 0.020
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVA----EGAPIIPISA----------QLKY 152
++++ NKIDL+ EG+ + +++ K +Q T+ GAPIIP++A +
Sbjct: 141 LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQ 200
Query: 153 NIEVLCEYITKKIPVPLRDFTSPPRMIVIRSFDV 254
I L E +T +I +P RD + P M V F +
Sbjct: 201 GIPELIELLTSQISIPTRDPSGPFLMSVDHCFSI 234
>UniRef50_A0LHL0 Cluster: Selenocysteine-specific translation
elongation factor; n=1; Syntrophobacter fumaroxidans
MPOB|Rep: Selenocysteine-specific translation elongation
factor - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 642
Score = 41.1 bits (92), Expect = 0.034
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQ-HEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYI 179
++K L++ KIDLV + E E + F++GT EGAPI+ +SA I L + +
Sbjct: 106 RVKQGLVVLTKIDLVDDPDWLEMVREDVADFLKGTFLEGAPILSVSAATGEGIGELKQAL 165
Query: 180 TKKI-PVPLRDFTSPPRMIVIRSF 248
T+ V R P R+ V R F
Sbjct: 166 TRLYEEVEPRSVEGPFRLPVDRVF 189
>UniRef50_O59411 Cluster: Putative uncharacterized protein PH1707;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1707 - Pyrococcus horikoshii
Length = 123
Score = 41.1 bits (92), Expect = 0.034
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = -2
Query: 495 GSIFVPTPIRPPGTAYCSSFCSANSETMRENMGRQVNLPSASLLTKPGRTSISIPTVRTP 316
GS FVPTP PPG A ++ A ET+ +G + LP +S PG SIS PT P
Sbjct: 65 GSSFVPTPTSPPGYASSTNCPPACRETISVVIGSYLILPCSS-YGIPGLISISSPTFNFP 123
>UniRef50_Q9JHW4 Cluster: Selenocysteine-specific elongation factor;
n=18; Eumetazoa|Rep: Selenocysteine-specific elongation
factor - Mus musculus (Mouse)
Length = 583
Score = 40.7 bits (91), Expect = 0.046
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTV----AEGAPIIPISA----------QLKY 152
++++ NKIDL+ EG+ + +++ K +Q T+ + GAPIIP++A +
Sbjct: 127 LVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLENTKSRGAPIIPVAAKPGGPEAPETEAPQ 186
Query: 153 NIEVLCEYITKKIPVPLRDFTSPPRMIVIRSFDV 254
I L E + +I +P RD + P M V F +
Sbjct: 187 GISELIELLKSQISIPTRDPSGPFLMSVDHCFSI 220
>UniRef50_Q3E0L1 Cluster: Translation elongation factor,
selenocysteine-specific:Small GTP- binding protein
domain; n=1; Chloroflexus aurantiacus J-10-fl|Rep:
Translation elongation factor,
selenocysteine-specific:Small GTP- binding protein
domain - Chloroflexus aurantiacus J-10-fl
Length = 622
Score = 39.9 bits (89), Expect = 0.079
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 LKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITK 185
++H +++ +K+DLV + E++ + + G+ API+P+SA+ + L + +
Sbjct: 111 IRHGIVVLSKVDLVDADWLELVREEVREALAGSTLASAPIVPVSARTGAGLAELLLTLDR 170
Query: 186 KI-PVPLRD-FTSPPRMIVIRSFDV 254
+ +P RD PR+ + RSF +
Sbjct: 171 LLDTLPARDQVRGVPRLAIDRSFTI 195
>UniRef50_Q057R5 Cluster: GTP-binding protein; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: GTP-binding
protein - Buchnera aphidicola subsp. Cinara cedri
Length = 297
Score = 38.7 bits (86), Expect = 0.18
Identities = 31/100 (31%), Positives = 55/100 (55%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
K K+I+++ NKIDL+ E K+ I+K + A + II ISA+ K +++L I
Sbjct: 115 KKKYIIVI-NKIDLITE--KKKLLPFILKISK--FAPNSEIILISAKKKKFLDILLTNIK 169
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDVISLVARLTIYGVAWQE 302
KK+P+ + S + I F +I+ + R T+ + ++E
Sbjct: 170 KKLPIANHKYISTKKTIYKEKF-LITEIIRKTLMHLLYKE 208
>UniRef50_Q46455 Cluster: Selenocysteine-specific elongation factor;
n=5; Clostridia|Rep: Selenocysteine-specific elongation
factor - Moorella thermoacetica (Clostridium
thermoaceticum)
Length = 634
Score = 38.7 bits (86), Expect = 0.18
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
++K +I+ KIDLV+ + E++ + V+GTV E AP++ +SA I L E +
Sbjct: 106 QIKKGIIVITKIDLVEADWLELVREEVRQAVKGTVLEDAPLVEVSALTGEGIAELREQLD 165
Query: 183 KKIPV-PLRDFTSPPRMIVIRSFDVISLVARLTIYGVAW 296
V P R R+ + R F V +T G W
Sbjct: 166 ALAAVTPPRPAAGRVRLPIDRVFSVTGFGTVVT--GTLW 202
>UniRef50_Q2LU53 Cluster: Selenocysteine-specific protein
translation Elongation Factor; n=1; Syntrophus
aciditrophicus SB|Rep: Selenocysteine-specific protein
translation Elongation Factor - Syntrophus
aciditrophicus (strain SB)
Length = 636
Score = 36.7 bits (81), Expect = 0.74
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 18 LILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQ 143
L+ KIDLV + E I F++G+ E AP+IP+S+Q
Sbjct: 111 LVALTKIDLVDRDWMELIREDITDFLKGSFLESAPVIPVSSQ 152
>UniRef50_Q8VZ74 Cluster: GTP-binding protein-like; n=9;
Magnoliophyta|Rep: GTP-binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 36.7 bits (81), Expect = 0.74
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIP 194
+L++ NK DL+K G+ ++ E KF V E +IP+SA+ + IE + E+I K+P
Sbjct: 243 MLLVMNKKDLIKPGEIAKKLEWYEKFTD--VDE---VIPVSAKYGHGIEDVKEWILSKLP 297
>UniRef50_A6BIM9 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 637
Score = 36.3 bits (80), Expect = 0.98
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Frame = +3
Query: 9 KHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKK 188
K I++L NK DLV E + E + + + GT E AP++ +SA ++ L + I +
Sbjct: 109 KSIIVL-NKCDLVDEEWLEMMEEDVREELSGTFLEHAPLVKVSAATGAGLDDLVKEIEHQ 167
Query: 189 I--PVPLRDFTSPPRMIVIRSFDVI---SLVARLTIYGVAWQED 305
V +D + PR+ + R F + +++ + G +ED
Sbjct: 168 TRDEVVQKDIHTIPRLPIDRVFTLSGFGTIITGTLVSGTITKED 211
>UniRef50_Q0HJL8 Cluster: Carboxyl-terminal protease precursor;
n=29; Gammaproteobacteria|Rep: Carboxyl-terminal
protease precursor - Shewanella sp. (strain MR-4)
Length = 683
Score = 35.5 bits (78), Expect = 1.7
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +2
Query: 206 GFHIASSYDCYS-FIRCNKPGCE--VDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDA 376
GF++ S D ++ N+ E V DLRG GG++ + VL G+ I++ P + +DA
Sbjct: 371 GFYMNLSQDVEKELVKLNEAKVEGVVIDLRGN-GGGALTEAVLLTGLFIDMGPVVQVRDA 429
Query: 377 DGKLT 391
DG+++
Sbjct: 430 DGRVS 434
>UniRef50_Q98218 Cluster: Nucleoside triphosphatase II; n=7;
Chordopoxvirinae|Rep: Nucleoside triphosphatase II -
Molluscum contagiosum virus subtype 1 (MOCV) (MCVI)
Length = 684
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +2
Query: 224 SYDCYSFIRCNKPGCEVDD-----LRGGVAGGS---ILQGVLTVGMEIEVRPGLVSKDA 376
S++CYSF+RC +PG E+ + LRG V GG+ I GV G G++ ++
Sbjct: 108 SFECYSFLRC-RPGLELREAGLALLRGLVVGGNRMRIFSGVRRAGASAATSAGMLGNES 165
>UniRef50_Q7ZVX1 Cluster: Solute carrier family 9 (Sodium/hydrogen
exchanger), isoform 3 regulatory factor 2; n=5; Danio
rerio|Rep: Solute carrier family 9 (Sodium/hydrogen
exchanger), isoform 3 regulatory factor 2 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 386
Score = 35.1 bits (77), Expect = 2.3
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Frame = +3
Query: 18 LILQNKIDLVK-EGQAKEQHEQIVKFVQGTVAEGAPIIPISAQ-----LKYNIEVLCEYI 179
L+ +K+ LV E E+H+Q+V ++ TV + ++ ++A+ LK+N++ EY+
Sbjct: 48 LLAGDKLALVNGENVEDEKHQQVVSRIRDTVGK-LELVVLNAETAELLLKHNLKCQKEYV 106
Query: 180 TKKIPVP 200
T IP+P
Sbjct: 107 TDGIPIP 113
>UniRef50_A7IGX4 Cluster: Signal transduction histidine kinase; n=1;
Xanthobacter autotrophicus Py2|Rep: Signal transduction
histidine kinase - Xanthobacter sp. (strain Py2)
Length = 596
Score = 34.3 bits (75), Expect = 4.0
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 514 RLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIGSL 693
RL+ Q + A IF E Y LK + VR G AA ++ + NIG L
Sbjct: 71 RLLQQAVAAAVSQQNIFASTENVLYALKNVEEVRAAGQSCAATLRGATISLPFAANIGVL 130
Query: 694 STGGRVIATKVDFG*KSPFTNP 759
GRV + F +S P
Sbjct: 131 DAQGRVTCAALPFPGRSVGEEP 152
>UniRef50_Q3LVV5 Cluster: Eukaryotic translation initiation factor
gamma SU; n=1; Bigelowiella natans|Rep: Eukaryotic
translation initiation factor gamma SU - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 439
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 290 GVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGL 469
G+ GGS+++G L IE+RPG + P ++I+ + ++ +P GL
Sbjct: 253 GIFGGSLIRGYLKKNQLIEIRPGTLKHK-----NTYPFLNKIIGIKDFNLDIPEILPRGL 307
Query: 470 IGVGTKI 490
I + T I
Sbjct: 308 IAIETNI 314
>UniRef50_Q2UPX8 Cluster: Predicted protein; n=5;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 815
Score = 34.3 bits (75), Expect = 4.0
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 501 SVGSIFVPTPIRP-PGTAYCSSFCSA-NSETMRENMGRQVNLPSASLLTKPGRTSISIPT 328
S GS+ VPTP P PG S+ C SET+ + V P+ + ++ G S+S+P
Sbjct: 630 SSGSV-VPTPSGPAPGEEASSTPCDTITSETVIASATTDVVPPAPTDVSPTGSESVSVPA 688
Query: 327 VRTP 316
V TP
Sbjct: 689 VPTP 692
>UniRef50_Q75CE1 Cluster: Dihydroorotate dehydrogenase,
mitochondrial precursor; n=4; Saccharomycetales|Rep:
Dihydroorotate dehydrogenase, mitochondrial precursor -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 444
Score = 33.9 bits (74), Expect = 5.2
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NK G EV+D GV L VL + + PGL +G+LT + S IV A+
Sbjct: 224 NKNGDEVEDYLRGVEKFQSLADVLVINVSSPNTPGLRDLQQEGRLT--ELLSMIV---AK 278
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCRL 511
+N L G ++G T P L ++
Sbjct: 279 RNSL--INEGNVLGASTHKPPVLVKI 302
>UniRef50_A6P2V2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 629
Score = 33.5 bits (73), Expect = 6.9
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 18 LILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPV 197
++ K DL E + + E + GT E AP+IP+SA+ ++ L I +P
Sbjct: 111 IVALTKADLADERRLTQVKEAVDALTAGTFLETAPVIPVSARTGLGLDELRTAIA-ALPP 169
Query: 198 PLRDFTSPPRMIVIRSFDV 254
++ P R+ V R F +
Sbjct: 170 RRQNTDFPFRLEVDRLFSL 188
>UniRef50_Q54JN5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 458
Score = 33.5 bits (73), Expect = 6.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 60 AKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYI 179
A++ H Q+VKF+ EG +S KYN E +C+Y+
Sbjct: 265 AQKGHLQVVKFLLENRDEGCTATALSLAAKYNHEEICKYL 304
>UniRef50_A0BTU2 Cluster: Chromosome undetermined scaffold_128,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_128,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 514
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGT-VAEGAPIIPISAQLKYNIEVLCEYITKKI 191
++++ NKIDL E +Q + I + T P++P+SA IE L + + I
Sbjct: 138 LIVVLNKIDLATEEVINKQKKIIANVLSKTKFGNQVPLVPVSAIQALGIEDLLGILLQNI 197
Query: 192 PVPLR 206
VP R
Sbjct: 198 TVPNR 202
>UniRef50_Q6NY07 Cluster: Eif2s3x protein; n=2; Euteleostomi|Rep:
Eif2s3x protein - Mus musculus (Mouse)
Length = 57
Score = 33.1 bits (72), Expect = 9.1
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +1
Query: 706 RVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
RV A K D G K TNP CT +GEK SRRVE
Sbjct: 1 RVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 33
>UniRef50_Q1JYY0 Cluster: Selenocysteine-specific translation
elongation factor; n=2; Desulfuromonas acetoxidans DSM
684|Rep: Selenocysteine-specific translation elongation
factor - Desulfuromonas acetoxidans DSM 684
Length = 642
Score = 33.1 bits (72), Expect = 9.1
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
+++ +I+ NK DL +E + E+I + V+GT +PI +S+ I+ L I
Sbjct: 111 QIRRGIIVLNKCDLAEEDWIELVEEEIREKVRGTFLHKSPIRRVSSVSGSGIDALRHTIQ 170
Query: 183 KKI-PVPLRDFTSPPRMIVIRSFDV 254
K I +P ++ R+ V R F V
Sbjct: 171 KTIEELPAKNCDGLLRLPVDRHFTV 195
>UniRef50_Q22UJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3144
Score = 33.1 bits (72), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 793 NANFFLQFPCNRGS*RAIFSQNQLLWRLLGRQYLTIQYLRG 671
N NFF+ C GS A+++QN + +L Q+ Q L G
Sbjct: 2304 NNNFFIDCSCQSGSGGALYAQNSIFQSILSNQFTGNQALLG 2344
>UniRef50_Q6BWV6 Cluster: Similar to sp|Q04080 Saccharomyces
cerevisiae GPI transamidase component GPI17; n=1;
Debaryomyces hansenii|Rep: Similar to sp|Q04080
Saccharomyces cerevisiae GPI transamidase component
GPI17 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 514
Score = 33.1 bits (72), Expect = 9.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 850 WNLVPQPINPPVDFLLFYSNANF 782
WNL+ INP ++F+L++ AN+
Sbjct: 290 WNLITHDINPSINFILYFPEANY 312
>UniRef50_A5DAS0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 586
Score = 33.1 bits (72), Expect = 9.1
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 284 RGGVAGGSILQGVLTV--GMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAEQNELQY 451
RG V LQG + + E+R L+S D K +P S ++SL NEL+Y
Sbjct: 104 RGAVCDRDTLQGARCIYGALNDEIRDILISFDISKKDAVQPFASHLISLLNPLNELRY 161
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 915,223,085
Number of Sequences: 1657284
Number of extensions: 19941363
Number of successful extensions: 48222
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 46253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48179
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -