Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0409
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.76 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   4.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   4.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   4.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   4.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   4.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   4.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   4.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   4.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   4.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.4  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 512 IDLWDKY*EQLDVYREFLSNSKYLI 586
           I LW  +  Q DV  ++LS ++Y+I
Sbjct: 434 IILWTSHLTQADVIEKYLSKARYVI 458


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 114 GAPIIPISAQLKYNIEVLCEYITKKIPVPLRDFTSPPRMIVIRSF 248
           GA +  I+ Q ++NIE+    ++    +P+  +TS  ++  +R F
Sbjct: 262 GAFLYTINGQGQFNIEMFLCNMSLLTVIPIHVWTSKEKISFLRGF 306


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 111 EGAPIIPISAQLKYNIEVLCEYITKKIPVP 200
           EG   +P + +  YNI+   EY T  +P+P
Sbjct: 46  EGKVQVPEALKKIYNIQNNFEYDTASLPLP 75


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 113 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 18
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 603 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 636


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 113 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 18
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 836 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 113 FSHSP--LNEFYNXXXXXXXXXXFN*IDLVL*YQ 18
           F+H P   NEFYN           N +DL++ Y+
Sbjct: 836 FTHCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 209 FHIASSYDCYSFIRCNKPGCEVDDLRGGVA 298
           F + +  DC   +RC K G +      G+A
Sbjct: 43  FRLTTEGDCRDVVRCTKSGLKQITCPSGLA 72


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 65  GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 94


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 849 GIWSPNQLTRQWIFYSSTPMLTFFSNSRAT 760
           G+ SP  L+       STP L+  SNS AT
Sbjct: 109 GVASPQDLSTNGAPPRSTPPLSTPSNSNAT 138


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 834 NQLTRQWIFYSST-PMLTFFSNSRATGVRKGRFLAKINFCG 715
           N +TR     S T P    F N      + G  LA+ NFCG
Sbjct: 539 NTITRASSQSSVTIPFERTFRNLDLNRPQGGEELAQFNFCG 579


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,617
Number of Sequences: 336
Number of extensions: 5267
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)