Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0409
(853 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19161-1|AAA19696.1| 472|Homo sapiens translation initiation fa... 158 2e-38
BC019906-1|AAH19906.1| 472|Homo sapiens eukaryotic translation ... 158 2e-38
AK222577-1|BAD96297.1| 472|Homo sapiens eukaryotic translation ... 158 2e-38
DQ120619-1|ABB92405.1| 471|Homo sapiens eFI-2-gamma protein. 156 8e-38
BC087847-1|AAH87847.1| 465|Homo sapiens Unknown (protein for IM... 156 8e-38
AJ006932-1|CAA07331.1| 248|Homo sapiens eIF-2gA protein. 151 2e-36
BC007933-1|AAH07933.1| 569|Homo sapiens EEFSEC protein protein. 42 0.003
AF268872-1|AAG13375.1| 526|Homo sapiens MJ0495-like protein Sel... 42 0.003
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 32 2.3
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 32 2.3
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 32 2.3
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 32 2.3
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 32 2.3
BC036768-1|AAH36768.1| 669|Homo sapiens GUF1 GTPase homolog (S.... 31 5.3
AK023282-1|BAB14507.1| 669|Homo sapiens protein ( Homo sapiens ... 31 5.3
>L19161-1|AAA19696.1| 472|Homo sapiens translation initiation
factor eIF-2 gamma subunit protein.
Length = 472
Score = 158 bits (384), Expect = 2e-38
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG EIEVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 324
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 325 HNDLQYAAPGGLIGVGTKIDPTLCR 349
Score = 155 bits (376), Expect = 2e-37
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+IVIRSFDV
Sbjct: 241 KKIPVPPRDFTSEPRLIVIRSFDV 264
Score = 144 bits (349), Expect = 4e-34
Identities = 75/101 (74%), Positives = 83/101 (82%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQVLGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+VNIG
Sbjct: 350 ADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG 409
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
SLSTGGRV A K D G K TNP CT +GEK SRRVE
Sbjct: 410 SLSTGGRVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 448
>BC019906-1|AAH19906.1| 472|Homo sapiens eukaryotic translation
initiation factor 2, subunit 3 gamma, 52kDa protein.
Length = 472
Score = 158 bits (384), Expect = 2e-38
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG EIEVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 324
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 325 HNDLQYAAPGGLIGVGTKIDPTLCR 349
Score = 155 bits (376), Expect = 2e-37
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+IVIRSFDV
Sbjct: 241 KKIPVPPRDFTSEPRLIVIRSFDV 264
Score = 144 bits (349), Expect = 4e-34
Identities = 75/101 (74%), Positives = 83/101 (82%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQVLGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+VNIG
Sbjct: 350 ADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG 409
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
SLSTGGRV A K D G K TNP CT +GEK SRRVE
Sbjct: 410 SLSTGGRVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 448
>AK222577-1|BAD96297.1| 472|Homo sapiens eukaryotic translation
initiation factor 2, subunit 3 gamma, 52kDa variant
protein.
Length = 472
Score = 158 bits (384), Expect = 2e-38
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG EIEVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 324
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 325 HNDLQYAAPGGLIGVGTKIDPTLCR 349
Score = 155 bits (376), Expect = 2e-37
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+IVIRSFDV
Sbjct: 241 KKIPVPPRDFTSEPRLIVIRSFDV 264
Score = 142 bits (344), Expect = 1e-33
Identities = 74/101 (73%), Positives = 83/101 (82%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQVLGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+V+IG
Sbjct: 350 ADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVSIG 409
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
SLSTGGRV A K D G K TNP CT +GEK SRRVE
Sbjct: 410 SLSTGGRVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 448
>DQ120619-1|ABB92405.1| 471|Homo sapiens eFI-2-gamma protein.
Length = 471
Score = 156 bits (379), Expect = 8e-38
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG E EVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 265 NKPGCEVDDLKGGVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 324
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 325 HNDLQYAAPGGLIGVGTKIDPTLCR 349
Score = 153 bits (370), Expect = 1e-36
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 181 KLKHILILQNKIDLVKERQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 240
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KK PVP RDFTS PR+IVIRSFDV
Sbjct: 241 KKFPVPPRDFTSEPRLIVIRSFDV 264
Score = 144 bits (348), Expect = 5e-34
Identities = 74/101 (73%), Positives = 83/101 (82%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQ+LGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+VNIG
Sbjct: 350 ADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG 409
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGIGEKS*HWSRRVE 810
SLSTGGRV A K D G K TNP CT +GEK SRRVE
Sbjct: 410 SLSTGGRVSAVKADLG-KIVLTNPVCTEVGEKI-ALSRRVE 448
>BC087847-1|AAH87847.1| 465|Homo sapiens Unknown (protein for
IMAGE:30389268) protein.
Length = 465
Score = 156 bits (379), Expect = 8e-38
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAE 433
NKPGCEVDDL+GGVAGGSIL+GVL VG E EVRPG+VSKD++GKL C+PIFS+IVSLFAE
Sbjct: 264 NKPGCEVDDLKGGVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKPIFSKIVSLFAE 323
Query: 434 QNELQYAVPGGLIGVGTKIEPTLCR 508
N+LQYA PGGLIGVGTKI+PTLCR
Sbjct: 324 HNDLQYAAPGGLIGVGTKIDPTLCR 348
Score = 154 bits (374), Expect = 3e-37
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 180 KLKHILILQNKIDLVKERQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 239
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+IVIRSFDV
Sbjct: 240 KKIPVPPRDFTSEPRLIVIRSFDV 263
Score = 135 bits (327), Expect = 2e-31
Identities = 67/89 (75%), Positives = 75/89 (84%)
Frame = +1
Query: 508 SDRLVGQVLGAVGCLPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLVKNEVLLVNIG 687
+DR+VGQ+LGAVG LP IF +LE+SY+LL+RLLGVRTEGDKKAAKVQKL KNEVL+VNIG
Sbjct: 349 ADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG 408
Query: 688 SLSTGGRVIATKVDFG*KSPFTNPCCTGI 774
SLSTGGRV A K D G K TNP CT I
Sbjct: 409 SLSTGGRVSAVKADLG-KIVLTNPVCTEI 436
>AJ006932-1|CAA07331.1| 248|Homo sapiens eIF-2gA protein.
Length = 248
Score = 151 bits (367), Expect = 2e-36
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +3
Query: 3 KLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYIT 182
KLKHILILQNKIDLVKE QAKEQ+EQI+ FVQGTVAEGAPIIPISAQLKYNIEV+CEYI
Sbjct: 121 KLKHILILQNKIDLVKERQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 180
Query: 183 KKIPVPLRDFTSPPRMIVIRSFDV 254
KKIPVP RDFTS PR+I IRSFDV
Sbjct: 181 KKIPVPPRDFTSEPRLIGIRSFDV 204
Score = 72.5 bits (170), Expect = 2e-12
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 254 NKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSK 370
NKPGCEVDDL+GGV GGSIL+GVL VG E EVRPGLVSK
Sbjct: 205 NKPGCEVDDLKGGVTGGSILKGVLKVGHETEVRPGLVSK 243
>BC007933-1|AAH07933.1| 569|Homo sapiens EEFSEC protein protein.
Length = 569
Score = 41.9 bits (94), Expect = 0.003
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVA----EGAPIIPISA----------QLKY 152
++++ NKIDL+ EG+ + +++ K +Q T+ GAPIIP++A +
Sbjct: 114 LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQ 173
Query: 153 NIEVLCEYITKKIPVPLRDFTSPPRMIVIRSFDV 254
I L E +T +I +P RD + P M V F +
Sbjct: 174 GIPELIELLTSQISIPTRDPSGPFLMSVDHCFSI 207
>AF268872-1|AAG13375.1| 526|Homo sapiens MJ0495-like protein SelB
protein.
Length = 526
Score = 41.9 bits (94), Expect = 0.003
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Frame = +3
Query: 15 ILILQNKIDLVKEGQAKEQHEQIVKFVQGTVA----EGAPIIPISA----------QLKY 152
++++ NKIDL+ EG+ + +++ K +Q T+ GAPIIP++A +
Sbjct: 71 LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQ 130
Query: 153 NIEVLCEYITKKIPVPLRDFTSPPRMIVIRSFDV 254
I L E +T +I +P RD + P M V F +
Sbjct: 131 GIPELIELLTSQISIPTRDPSGPFLMSVDHCFSI 164
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 27 QNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLR 206
++K+ KEG+A+E I K +Q +P Q +V+ E I K P P
Sbjct: 95 RHKVSEFKEGKAQEPSAAIPKVMQQQQQTTQQQLPQKVQA----QVIQETIVPKEPPPEF 150
Query: 207 DFTSPPRMIVIRSFDVISLVAR 272
+F + P I DV+ L A+
Sbjct: 151 EFIADPPSISAFDLDVVKLTAQ 172
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 27 QNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLR 206
++K+ KEG+A+E I K +Q +P Q +V+ E I K P P
Sbjct: 95 RHKVSEFKEGKAQEPSAAIPKVMQQQQQTTQQQLPQKVQA----QVIQETIVPKEPPPEF 150
Query: 207 DFTSPPRMIVIRSFDVISLVAR 272
+F + P I DV+ L A+
Sbjct: 151 EFIADPPSISAFDLDVVKLTAQ 172
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 27 QNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLR 206
++K+ KEG+A+E I K +Q +P Q +V+ E I K P P
Sbjct: 95 RHKVSEFKEGKAQEPSAAIPKVMQQQQQTTQQQLPQKVQA----QVIQETIVPKEPPPEF 150
Query: 207 DFTSPPRMIVIRSFDVISLVAR 272
+F + P I DV+ L A+
Sbjct: 151 EFIADPPSISAFDLDVVKLTAQ 172
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 27 QNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLR 206
++K+ KEG+A+E I K +Q +P Q +V+ E I K P P
Sbjct: 95 RHKVSEFKEGKAQEPSAAIPKVMQQQQQTTQQQLPQKVQA----QVIQETIVPKEPPPEF 150
Query: 207 DFTSPPRMIVIRSFDVISLVAR 272
+F + P I DV+ L A+
Sbjct: 151 EFIADPPSISAFDLDVVKLTAQ 172
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 27 QNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLR 206
++K+ KEG+A+E I K +Q +P Q +V+ E I K P P
Sbjct: 95 RHKVSEFKEGKAQEPSAAIPKVMQQQQQTTQQQLPQKVQA----QVIQETIVPKEPPPEF 150
Query: 207 DFTSPPRMIVIRSFDVISLVAR 272
+F + P I DV+ L A+
Sbjct: 151 EFIADPPSISAFDLDVVKLTAQ 172
>BC036768-1|AAH36768.1| 669|Homo sapiens GUF1 GTPase homolog (S.
cerevisiae) protein.
Length = 669
Score = 31.1 bits (67), Expect = 5.3
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 30 NKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLRD 209
NKIDL K + QI K E I ISA+L N+E + + I ++IP P
Sbjct: 194 NKIDL-KNADPERVENQIEKVFDIPSDE---CIKISAKLGTNVESVLQAIIERIPPPKVH 249
Query: 210 FTSPPRMIVIRS-FDVI-SLVARLTIY-GVAWQEDQ 308
+P R +V S FD ++A + ++ GV + D+
Sbjct: 250 RKNPLRALVFDSTFDQYRGVIANVALFDGVVSKGDK 285
>AK023282-1|BAB14507.1| 669|Homo sapiens protein ( Homo sapiens
cDNA FLJ13220 fis, clone NT2RP4002047, moderately
similar to GTP-BINDING PROTEIN LEPA. ).
Length = 669
Score = 31.1 bits (67), Expect = 5.3
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 30 NKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLRD 209
NKIDL K + QI K E I ISA+L N+E + + I ++IP P
Sbjct: 194 NKIDL-KNADPERVENQIEKVFDIPSDE---CIKISAKLGTNVESVLQAIIERIPPPKVH 249
Query: 210 FTSPPRMIVIRS-FDVI-SLVARLTIY-GVAWQEDQ 308
+P R +V S FD ++A + ++ GV + D+
Sbjct: 250 RKNPLRALVFDSTFDQYRGVIANVALFDGVVSKGDK 285
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,230,228
Number of Sequences: 237096
Number of extensions: 3151280
Number of successful extensions: 9628
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9622
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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