BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0408
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146818-1|AAI46819.1| 777|Homo sapiens similar to CTAGE6 protein. 33 0.97
BC043153-1|AAH43153.1| 732|Homo sapiens CTAGE6 protein protein. 33 0.97
AL135904-2|CAB99213.1| 777|Homo sapiens dJ1005H11.2 (WUGSC:H_DJ... 33 1.3
AC005587-2|AAD05194.1| 777|Homo sapiens unknown protein. 33 1.3
>BC146818-1|AAI46819.1| 777|Homo sapiens similar to CTAGE6 protein.
Length = 777
Score = 33.5 bits (73), Expect = 0.97
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 307 IDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDIS 486
++SS EDA A +E + T + L +++ E +C+++DL E+S D++
Sbjct: 108 VESSLEDASFEKAAAEEARSLEATCEKLNRSNSELEDEILCLEKDLKEEKSKHSQQDELM 167
Query: 487 VDTPTS 504
D S
Sbjct: 168 ADISKS 173
>BC043153-1|AAH43153.1| 732|Homo sapiens CTAGE6 protein protein.
Length = 732
Score = 33.5 bits (73), Expect = 0.97
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 307 IDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDIS 486
++SS EDA A +E + T + L +++ E +C+++DL E+S D++
Sbjct: 63 VESSLEDASFEKAAAEEARSLEATCEKLNRSNSELEDEILCLEKDLKEEKSKHSQQDELM 122
Query: 487 VDTPTS 504
D S
Sbjct: 123 ADISKS 128
>AL135904-2|CAB99213.1| 777|Homo sapiens dJ1005H11.2
(WUGSC:H_DJ0988G15.3 PROTEIN) protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 307 IDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDIS 486
++SS EDA A +E + T + L +++ E +C+++DL E+S D++
Sbjct: 108 VESSLEDASFEKAAAEEARSLEATCEKLSRSNSELEDEILCLEKDLKEEKSKHSQQDELM 167
Query: 487 VDTPTS 504
D S
Sbjct: 168 ADISKS 173
>AC005587-2|AAD05194.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 307 IDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDIS 486
++SS EDA A +E + T + L +++ E +C+++DL E+S D++
Sbjct: 108 VESSLEDASFEKAAAEEARSLEATCEKLSRSNSELEDEILCLEKDLKEEKSKHSQQDELM 167
Query: 487 VDTPTS 504
D S
Sbjct: 168 ADISKS 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,936,984
Number of Sequences: 237096
Number of extensions: 1615898
Number of successful extensions: 2858
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2858
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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