Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0408
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061504-1|AAL29052.1|  263|Drosophila melanogaster LD46221p pro...    33   0.64 
AE013599-2643|AAF57732.2|  263|Drosophila melanogaster CG10916-P...    33   0.64 
X05136-1|CAA28782.1|  590|Drosophila melanogaster protein ( Dros...    30   4.5  
M13373-1|AAA28375.1|  427|Drosophila melanogaster protein ( D.me...    30   4.5  
AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA ...    30   4.5  
AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain ...    30   4.5  
AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p pro...    29   7.9  

>AY061504-1|AAL29052.1|  263|Drosophila melanogaster LD46221p
           protein.
          Length = 263

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 334 ENNADEKEGNGGKITNQPLRSNDNSSELYTIC 429
           E+N+ E EGNGGKI  +   +ND+S  L  +C
Sbjct: 2   ESNSSEMEGNGGKIA-ETAPTNDSSPSLNILC 32


>AE013599-2643|AAF57732.2|  263|Drosophila melanogaster CG10916-PA
           protein.
          Length = 263

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 334 ENNADEKEGNGGKITNQPLRSNDNSSELYTIC 429
           E+N+ E EGNGGKI  +   +ND+S  L  +C
Sbjct: 2   ESNSSEMEGNGGKIA-ETAPTNDSSPSLNILC 32


>X05136-1|CAA28782.1|  590|Drosophila melanogaster protein (
           Drosophila mRNA forDeformed (Dfd) protein. ).
          Length = 590

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 319 CEDAGENNADEKEGNGGKITNQP--LRSNDNSSELYTICVDEDLGTE 453
           C+D G  N D  E +   +   P  L SNDN  +L     DEDL  E
Sbjct: 289 CDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAE 335


>M13373-1|AAA28375.1|  427|Drosophila melanogaster protein (
           D.melanogaster (ANT-C locus) deformed (Dfd) mRNA with a
           homeo box. ).
          Length = 427

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 319 CEDAGENNADEKEGNGGKITNQP--LRSNDNSSELYTICVDEDLGTE 453
           C+D G  N D  E +   +   P  L SNDN  +L     DEDL  E
Sbjct: 127 CDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAE 173


>AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA
           protein.
          Length = 586

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 319 CEDAGENNADEKEGNGGKITNQP--LRSNDNSSELYTICVDEDLGTE 453
           C+D G  N D  E +   +   P  L SNDN  +L     DEDL  E
Sbjct: 289 CDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAE 335


>AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain
           protein protein.
          Length = 586

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 319 CEDAGENNADEKEGNGGKITNQP--LRSNDNSSELYTICVDEDLGTE 453
           C+D G  N D  E +   +   P  L SNDN  +L     DEDL  E
Sbjct: 289 CDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAE 335


>AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p
           protein.
          Length = 1196

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 364 GGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDISV 489
           GG   N+PL ++D+  E + + ++ +L   E+   F DDI +
Sbjct: 642 GGSKINEPLGNSDDMMEQHLVEIERELIKHENRYSFLDDIII 683


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,653,124
Number of Sequences: 53049
Number of extensions: 559047
Number of successful extensions: 1625
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)