Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0408
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 30 2.4
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 30 2.4
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 3.1
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 29 5.4
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 29 5.4
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 29 5.4
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 28 9.5
U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 376 TNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDI 483
TN L +D+ SE Y+ +ED G STK+F+D++
Sbjct: 459 TNFALEEDDSESE-YSESEEEDDGVGNSTKMFHDEV 493
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 540 TPLVSVQFRDKKLASSYKQKVKAFMLKLIKIHNDDALEGSECETDLELD 686
TP V + D++ S+Y K K K IK+H ALE E E D + +
Sbjct: 79 TPKVD-RVEDQRYHSTYHNKNKMHRSKYIKVHAWQALERDEPEYDYDTE 126
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 540 TPLVSVQFRDKKLASSYKQKVKAFMLKLIKIHNDDALEGSECETDLELD 686
TP V + D++ S+Y K K K IK+H ALE E E D + +
Sbjct: 79 TPKVD-RVEDQRYHSTYHNKNKMHRSKYIKVHAWQALERDEPEYDYDTE 126
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 337 NNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNTTV 516
N+ + G ++N +N NS E DE++ E+ I DD +TP TT+
Sbjct: 143 NSVCQVPEKGSGVSNSDTSTNGNSDEK-----DEEIAKEDDEGIDEDDGDEETPEQKTTI 197
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 313 SSCEDAGENNADEKEGNGGKITNQPLRSND 402
S +DA +++E EGNG I N + S D
Sbjct: 811 SRSDDADVESSEEDEGNGNNILNTSMESED 840
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 313 SSCEDAGENNADEKEGNGGKITNQPLRSND 402
S +DA +++E EGNG I N + S D
Sbjct: 818 SRSDDADVESSEEDEGNGNNILNTSMESED 847
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 307 IDSSCEDAGENNADEKEGNGGK--ITNQPLRSNDN 405
++ S ED NN D +G GGK ++ +++ND+
Sbjct: 37 VNGSNEDGENNNVDGNDGKGGKGALSQDAIQNNDD 71
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 313 SSCEDAGENNADEKEGNGGKITNQPLRSND 402
S +DA +++E EGNG I N + S D
Sbjct: 811 SRSDDADVESSEEDEGNGNNILNTSMESED 840
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 313 SSCEDAGENNADEKEGNGGKITNQPLRSND 402
S +DA +++E EGNG I N + S D
Sbjct: 818 SRSDDADVESSEEDEGNGNNILNTSMESED 847
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = +3
Query: 579 ASSYKQKVKAFMLKLIKIHNDDALEGSECETDLELDIW 692
++SY QK K+F+ ++ + ++ + +EC+ D ++D+W
Sbjct: 276 STSYIQKAKSFLDEVNEEEENENIIETECQQD-DVDVW 312
>U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical
protein T27A10.6 protein.
Length = 870
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 289 PVDVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKI 468
P+ + N+D A EN+ +E N NQ L N +DE+ EE ++
Sbjct: 719 PISMTNLDGFSSSASENSREEDNAN----QNQHLSKMSNPE------LDEEESKEEIEEV 768
Query: 469 FNDDISVD 492
+ +I +D
Sbjct: 769 SDSEIEID 776
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,888
Number of Sequences: 27780
Number of extensions: 301492
Number of successful extensions: 915
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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