Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0407
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0328 + 2553850-2553902,2553990-2554050,2554163-2554321          119   2e-27
02_01_0082 - 564946-565075,565164-565384,565662-565916                 31   1.1  
09_06_0257 + 21891523-21891578,21891911-21892421,21893021-218930...    29   2.5  
12_01_0515 + 4081373-4081622,4081725-4081867,4082061-4082219,408...    28   5.9  
03_01_0075 - 618917-618980,619752-619818,619874-620029,620237-62...    28   7.7  

>03_01_0328 + 2553850-2553902,2553990-2554050,2554163-2554321
          Length = 90

 Score =  119 bits (286), Expect = 2e-27
 Identities = 44/68 (64%), Positives = 60/68 (88%)
 Frame = +1

Query: 46  QIQYSERYTDDVYEYRHVILPPDIARMVPKSHLMTETEWRNLGVQQSPGWLHFMVHNPEP 225
           QIQYSE+Y DD YEYRHV+LPP++A+++PK+ L++E EWR +GVQQS GW+H+ +H PEP
Sbjct: 3   QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 62

Query: 226 HVLLFRRP 249
           H++LFRRP
Sbjct: 63  HIMLFRRP 70


>02_01_0082 - 564946-565075,565164-565384,565662-565916
          Length = 201

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +3

Query: 330 RHIFRCH----SLILFKLLIETIIVKTKQKNFSIYYKLADINYYY 452
           +H +RCH       L    +E + ++ KQK   ++YKLA +N+ Y
Sbjct: 85  KHSWRCHVEPPPNALETAEVEALKLEVKQKKEELFYKLATLNWQY 129


>09_06_0257 +
           21891523-21891578,21891911-21892421,21893021-21893092,
           21893571-21893875,21894085-21894196,21894514-21894750,
           21894933-21895640
          Length = 666

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 158 SGETLVFSRVPAGSTLWCIILNPMFYYL 241
           S   L+++RV  GS L+ + ++P FYYL
Sbjct: 73  SSMVLMWNRVFLGSCLFALFIDPFFYYL 100


>12_01_0515 +
           4081373-4081622,4081725-4081867,4082061-4082219,
           4082339-4082518,4082616-4082845,4082959-4083099,
           4083366-4083420
          Length = 385

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 31  VMPVDQIQYSERYTDDVYEY--RHVILPPDIARMVP---KSHLMTETEWRNLGVQQSP 189
           + P D    S +Y   + E+  R+   PP +A  +    K+  +  +EW+N GVQ  P
Sbjct: 95  LFPCDVTDESPQYHAYLQEFYRRNCSAPPSVAAAISLCLKNERILRSEWQNRGVQVHP 152


>03_01_0075 -
           618917-618980,619752-619818,619874-620029,620237-620315,
           620797-620961,621070-621147,621327-621391,621433-621517,
           621864-621920,622303-622386,622568-622650,623104-623164,
           623292-623357,623468-623595,623696-623741
          Length = 427

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 324 LHRHIFRCHSLILFKLLIETIIVKTKQKNFSIYY 425
           LH +++ C+SL+LF    E+I V   ++ F  Y+
Sbjct: 87  LHINVYLCNSLLLFAPNCESIRVDISEEKFLKYF 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,976
Number of Sequences: 37544
Number of extensions: 322296
Number of successful extensions: 672
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)