Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0406
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.0  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   4.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   4.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   4.0  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 300 DQLSSSCTPYNVRGRMHLQ*NHHIPPR*GKRHIPCC 193
           DQ +  C P   R ++  + N H P R   R   CC
Sbjct: 581 DQQNQWCKPCRPREQLTWRRNFHGPHRLAARSRRCC 616


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 300 DQLSSSCTPYNVRGRMHLQ*NHHIPPR*GKRHIPCC 193
           DQ +  C P   R ++  + N H P R   R   CC
Sbjct: 473 DQQNQWCKPCRPREQLTWRRNFHGPHRLAARSRRCC 508


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 153 GESSLASLTHHTRTFHCCLYGFDPQRTVHWP 61
           G+  L SL  +  T H    G +P+R + +P
Sbjct: 142 GQIMLNSLHKYKPTVHLVRVGTEPRRVISFP 172


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 215 VRGISHAAVENSPSW 171
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 215 VRGISHAAVENSPSW 171
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 809 YQKVKIPKVYRYMSYINLQPLNPPER*YTCFYIFLFIL 696
           Y   K P  Y Y+S I +   N P++  T   I+ FI+
Sbjct: 136 YTHAKPP--YSYISLITMAIQNSPQKMLTLSEIYQFIM 171


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 77  EQSIGPSTDIWEDNRTECRPI 15
           EQS+ P T   +D ++E  P+
Sbjct: 202 EQSLSPDTVFGDDGKSEDVPV 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,009
Number of Sequences: 336
Number of extensions: 4844
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)