Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0403
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   3.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   3.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.4  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 183 FVCELAXIXLAVGVLEL 133
           F+C+LA   LAVG++ +
Sbjct: 84  FICQLAIADLAVGLISV 100


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 518 TLHIYFVQRHRGSNTRRMIISWTLTPLSTSIAPN*FAFH 402
           T+ ++F  R      +RM I+W    + T  A     FH
Sbjct: 114 TIKVWFQNRRMKDKRQRMAIAWPYAAVYTDPAFAASIFH 152


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 243 NVLCRNHKCITDASSGDRSAPHSFRTRCN 329
           N L    KC  D +   R  P +  T C+
Sbjct: 48  NCLLEKGKCTPDGAELKRHLPDALHTECS 76


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 476 TRRMIISWTLTPLSTSIAPN*FAFHLLRLN 387
           T R   SWT   +   +    F F L +LN
Sbjct: 95  TIRSTFSWTFIDVFIMLTSTAFVFRLKQLN 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,471
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)