Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0403
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 96 2e-20
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 94 9e-20
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 93 2e-19
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 91 9e-19
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 91 9e-19
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 91 9e-19
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 67 1e-11
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 66 2e-11
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 64 7e-11
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 52 4e-07
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 45 6e-05
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 34 0.11
01_06_1603 - 38564330-38564341,38564608-38564835 29 4.0
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 28 5.2
10_08_0384 - 17430316-17430470,17430647-17430813,17431234-174315... 27 9.2
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 144
NAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 179
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 93.9 bits (223), Expect = 9e-20
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 138 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 183
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 144
NAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ + N
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIAN 179
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 149 NAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 194
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 255 NAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 300
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 177
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 66.9 bits (156), Expect = 1e-11
Identities = 25/46 (54%), Positives = 39/46 (84%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
+AM+ AEITD L LHS++N +W+IQA+CA +G+GLY+GL W++ ++
Sbjct: 241 DAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKV 286
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 141
AM E+ + LGL+ L+NR W+IQ +CA GDGLYEGLDWL++ LK
Sbjct: 133 AMTPLEVCEGLGLYDLKNRIWHIQGSCALKGDGLYEGLDWLASTLK 178
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
AM E+ + LGL+ L NR W+IQ TCA GDGLYEGLDWL+ L
Sbjct: 133 AMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYEGLDWLATTL 177
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 AMNAAEITDKLGLHS-LRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 144
AM+++E+ +LG + L+NR W+ Q A +GDGL+ GLDWL++ L++
Sbjct: 132 AMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLRD 179
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLD 120
A++ A IT+ L LH +++R W I T A G+GL+EGLD
Sbjct: 148 ALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLD 186
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 153
A+ E+ L L L R + QA A G G+ G+DWL +++ + R
Sbjct: 273 AVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERSKR 322
>01_06_1603 - 38564330-38564341,38564608-38564835
Length = 79
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 32 NWVCIRCATVTGTSKRHAPLPETDCTRVSTGS 127
+W+C+ G S APL + C ++TG+
Sbjct: 22 HWMCLHVPFTVGASVPFAPLIKPTCVEIATGA 53
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 105 QSVSGSGACRLDVPVTVAQRMQTQFV 28
Q +G+G C +DVP+ AQ +Q FV
Sbjct: 171 QDCNGTGCCSIDVPIR-AQTLQLMFV 195
>10_08_0384 -
17430316-17430470,17430647-17430813,17431234-17431531,
17431797-17431880,17432321-17432437,17433883-17433976,
17434893-17435035,17435134-17435297,17435753-17435918,
17436394-17436560,17436894-17437020,17439805-17439901
Length = 592
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 329 YGTLCALKYCFSKYYINYVYLNAINGMQINS 421
+GT + K+ + KYY Y YL ++ +Q S
Sbjct: 383 HGTRASYKFHYPKYYSEYTYLIPLSKLQDGS 413
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,319,804
Number of Sequences: 37544
Number of extensions: 311835
Number of successful extensions: 788
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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