Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0403
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 103 1e-22
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 91 8e-19
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 91 8e-19
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 68 6e-12
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 57 1e-08
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical ... 29 2.0
AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical ... 28 4.7
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 27 8.2
U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical pr... 27 8.2
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 103 bits (247), Expect = 1e-22
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 144
AMNAAE+TDKLGLHSLRNR+WYIQATCATSGDGLYEGLDWLSNQLKN
Sbjct: 133 AMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKN 179
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 132 NAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
NAM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 132 NAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 67.7 bits (158), Expect = 6e-12
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 141
+AM EI DKLGL +R+RNWY+Q +CA++GDGL+EGL WLS K
Sbjct: 128 DAMKPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWLSQNCK 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 141
NA + AE+T L L SL+NR W+I T A SG GLYEGL W+ Q+K
Sbjct: 132 NARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRN-RNWYIQATCATSGDGLYEGLDWLSNQL 138
AMN AE++ +LGL +LR R W I CA G+GL E L+W++N L
Sbjct: 133 AMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 153
A ++ EIT KL L LR+R W+IQA A +G+ +G+ W+++ LK A++
Sbjct: 134 AASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLKPASK 183
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
AM A++IT LGL+ R+ W I +TCA +GDGL + + LS ++
Sbjct: 137 AMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 7 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 141
+ E+ LGL +LRNR I T A+ G+GL +DWL+NQL+
Sbjct: 133 LTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQ 177
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 4 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 138
A++ I L LHS+++ +W I + CA SGD L + + WL + +
Sbjct: 132 AIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDV 176
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 323 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 448
+ Y + K F YY Y+ ING I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145
>AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical
protein F26D11.4 protein.
Length = 247
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 1 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 132
N A EI D HS WY ++T T D ++ + +LSN
Sbjct: 143 NGTTAFEIADGSSNHSYLQSAWYTESTRRTDQDIVFNCMMYLSN 186
>AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical
protein C04E12.10 protein.
Length = 658
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -3
Query: 248 YIVFNSK*S*HILNHSLFQLSDLSASWRTYX*RLAFLS*LESQSRPSYSPSPEVAHVAWM 69
YI F ++ +H+ SD+S Y R+ E+ +P Y H+ WM
Sbjct: 275 YIKFTYDVINNVYSHNNVDGSDVSPRKLQYIERIVHEGNNEAFIQPDYPEEVNGGHIDWM 334
Query: 68 YQLR 57
+QL+
Sbjct: 335 FQLK 338
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 289 VTEARRIRSEPDAIRHVVCAEILFL*IL 372
++E R +R+ P+A+R ++ A +LF+ IL
Sbjct: 2895 LSEIRSLRAPPEAVRDILQAVLLFMGIL 2922
>U64845-6|AAC48028.1| 556|Caenorhabditis elegans Hypothetical
protein F45F2.5 protein.
Length = 556
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 323 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLY 436
++Y C L Y + Y Y+YL + INS C+Y
Sbjct: 67 LEYSIFCVLMYAVAVAYFLYLYLFVLYPNVINS--CIY 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,151,965
Number of Sequences: 27780
Number of extensions: 284320
Number of successful extensions: 711
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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