Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0402
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1MAU8 Cluster: Putative transmembrane component of ABC...    35   1.8  
UniRef50_O67097 Cluster: Organic solvent tolerance protein; n=1;...    33   5.5  
UniRef50_Q6E789 Cluster: Ribosomal protein S3; n=1; Saprolegnia ...    33   7.3  
UniRef50_Q7RH24 Cluster: Streptococcus pyogenes AMV156, putative...    33   7.3  
UniRef50_O45171 Cluster: Serpentine receptor, class h protein 12...    33   7.3  

>UniRef50_Q1MAU8 Cluster: Putative transmembrane component of ABC
           transporter precursor; n=1; Rhizobium leguminosarum bv.
           viciae 3841|Rep: Putative transmembrane component of ABC
           transporter precursor - Rhizobium leguminosarum bv.
           viciae (strain 3841)
          Length = 279

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = -2

Query: 437 SVRATLLQNCIGTAGARGTAYSNESGSFVLHARFLYPRIVPKLNIRF 297
           +V  T+L   IGTA A G A  N  G   L + FL P IVP + I F
Sbjct: 81  AVLTTVLSVTIGTAAAVGLARGNFPGKAALTSAFLSPLIVPPVVIGF 127


>UniRef50_O67097 Cluster: Organic solvent tolerance protein; n=1;
           Aquifex aeolicus|Rep: Organic solvent tolerance protein
           - Aquifex aeolicus
          Length = 653

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 195 YVYFHTKKRKSYKIHIKPCFNEYNIDT*QINQRKKSNV*FRYYTRIQEACVQDETTAFVA 374
           + Y + KK K Y ++ K  F E+N +  +I Q  K    F+ Y      C  D+   ++ 
Sbjct: 80  FAYVNMKKNKGYFLNAKGKFREFNFEAKKIEQLDKER--FKVYEATVTTCPLDDKELYLC 137

Query: 375 I 377
           I
Sbjct: 138 I 138


>UniRef50_Q6E789 Cluster: Ribosomal protein S3; n=1; Saprolegnia
           ferax|Rep: Ribosomal protein S3 - Saprolegnia ferax
          Length = 296

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
 Frame = -3

Query: 733 LSN*PNVTLSIFYVVHFKLRNYRK----CHFRYSKKNVNRRTKSNLGLSIVYXG*MTFTL 566
           L+N  N+ L  F   HFKL NY+K      ++Y KK   RR K    L  +    + FTL
Sbjct: 95  LNNKYNIKL-FFLKAHFKLNNYQKNLRFYIYKYLKKK-RRRLKDKKILKFLSICQIAFTL 152

Query: 565 KYIVFEVNLINHRILLRKSIKKQGENKHHAIGINKFVNILISFPLEPHYFKIASEPRARG 386
                ++N+I+  I+  ++IKK+  ++ +   IN+ +        +   +K+  + R  G
Sbjct: 153 G----KMNIISKYIV--RTIKKKKIHRGYLNFINRILKEYFKMNSKILGYKLQVKGRVNG 206

Query: 385 APR 377
           A R
Sbjct: 207 AKR 209


>UniRef50_Q7RH24 Cluster: Streptococcus pyogenes AMV156, putative;
           n=5; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
           AMV156, putative - Plasmodium yoelii yoelii
          Length = 1016

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
 Frame = +1

Query: 109 SIDYIDCPYVQYRN*KFAIFFYDTKMFLFMYIFTQKREKAIKYILNHVLMSIISILNKSI 288
           +I+YI+  Y +Y +    IF     +F  M+I + ++ K +K+ILN++      I NK I
Sbjct: 121 NINYINHQY-EYTH--TGIFDNIDSIFDXMHIISNEKTKKLKFILNYISEHRNEITNKDI 177

Query: 289 S--VKNRMFNFGTIRGYKKRA 345
              +  R+FN      YK ++
Sbjct: 178 PDIICERIFNLLNYEYYKSKS 198


>UniRef50_O45171 Cluster: Serpentine receptor, class h protein 127;
           n=2; Caenorhabditis|Rep: Serpentine receptor, class h
           protein 127 - Caenorhabditis elegans
          Length = 331

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 50  FFISCTFYI--FRDVPFSKLHIQLIISTVPTYSIETENLRFFFMTL 181
           +F SCT++I     VP+ +  +  ++  +P YS+ T+ +  F  TL
Sbjct: 150 YFASCTYFIPLLFFVPYQEEAVPYVLKQIPCYSVYTKTVPLFVFTL 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,626,363
Number of Sequences: 1657284
Number of extensions: 12550489
Number of successful extensions: 30484
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30468
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)