Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0402
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 15  LNFTLL*KIISFFSFPVHFTFSEMCPF 95
           L  TLL K++    FP+   FS M  F
Sbjct: 53  LPLTLLYKLLGIIQFPISAHFSFMSRF 79


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 15 LNFTLL*KIISFFSFPVHFTFSEMCPF 95
          L  TLL K++    FP+   FS M  F
Sbjct: 9  LPLTLLYKLLGIIQFPISAHFSFMSRF 35


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 397 RARGAPRIATKAVVSSCTHAS 335
           R +G PR ATK  +SS    S
Sbjct: 29  RKQGVPREATKITLSSLAKGS 49


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 574 MSFTRSILSKVPNSILYVD*HFFWSIESDTSDNFLI*NV 690
           +SF   I     + + Y+D  FF+  E    + FLI N+
Sbjct: 202 ISFLLIISYSTLHFVNYIDDLFFFRFEKSKFEPFLISNI 240


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 728 KLTECDSFDILRGTF 684
           K T  D F+I RGTF
Sbjct: 276 KFTAADFFEIDRGTF 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,298
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)