Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0402
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948     29   5.1  
02_05_1205 + 34939062-34939919                                         29   5.1  

>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
          Length = 712

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 226 AIKYILNHVLMSIISILNKSISVKNRMFNFGTIRGYKKRACRTKLPLSLLYA 381
           +++Y+LN +     + +    +V   +  F  + GY++R    KL L LL+A
Sbjct: 19  SVRYLLNQIGSDRTTHIQILATVGGALLGFQALLGYRRRRSSNKLFLVLLWA 70


>02_05_1205 + 34939062-34939919
          Length = 285

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 315 RYYTRIQEACVQDETTAFVAIRGAPRARGSDAIL 416
           R+  R++EA ++ +T A      APR  G DA+L
Sbjct: 80  RFLFRVEEAFLRSDTAAVTVEVRAPRRFGGDAVL 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,553
Number of Sequences: 37544
Number of extensions: 294254
Number of successful extensions: 637
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)