Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0400
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.1  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 43  RTKRKRRQKISRSFCT-CGANEELILLNTWL 132
           R  R  R+++  ++ T  GAN + +++NTW+
Sbjct: 281 RNIRGPRKRLRFAYVTRTGANIKKLIVNTWI 311


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 212 FFVSTPRPVSLNTARANSFFRLTPFFLS 129
           FF  TPR + L        F    FFL+
Sbjct: 15  FFALTPRSIKLEKQTFIQKFYAVAFFLA 42


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 81  FLHLWRKRRINIIKY 125
           FL+ W K  IN++K+
Sbjct: 119 FLNEWTKIEINLLKH 133


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 506 ISXSTLHFISF 474
           IS STLHF+++
Sbjct: 208 ISYSTLHFVNY 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,380
Number of Sequences: 336
Number of extensions: 2979
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)