Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0400
         (536 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-304|AAS64931.1|  446|Drosophila melanogaster CG33230-PA...    46   4e-05
AY113399-1|AAM29404.1|  221|Drosophila melanogaster RE09466p pro...    28   7.0  
AE014296-807|AAF47870.2|  221|Drosophila melanogaster CG1265-PB ...    28   7.0  

>AE014296-304|AAS64931.1|  446|Drosophila melanogaster CG33230-PA
           protein.
          Length = 446

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
 Frame = +1

Query: 37  MGRTKRKRRQKISRSFCTCGANEELILLNTWLKKNGVRRKKELALAVFSDTGRGVLTK-K 213
           MGRT+R+R Q+  +S    G+  +L +    L   G +    L+   +  TGRG+ +K K
Sbjct: 1   MGRTQRRRHQRAKKSDENSGSLHDLYV---HLHSVGWQNHTHLSAQYYEQTGRGLCSKQK 57

Query: 214 RIRPGDELISLPLNLLLMYPQS*WTGRFVAFS*KIKYLVYLPTRKQCRFSHY*HFI*HI* 393
              P DELI LP+  L+        G F +   +  +        Q   + Y  +  H+ 
Sbjct: 58  TFSPEDELIRLPIGCLISIATLESDGPFKSLFDEELFDKDSRISFQALIACYILYHKHLQ 117

Query: 394 KLKVLKQSG--HIYLKNLPQEYTVPYFLP-NEIKC 489
           +  +   S     YL  LP+ Y+ PYF    E++C
Sbjct: 118 ECTLGTHSSTYAAYLDTLPRCYSTPYFCSIPELQC 152


>AY113399-1|AAM29404.1|  221|Drosophila melanogaster RE09466p
           protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 27/96 (28%), Positives = 42/96 (43%)
 Frame = +3

Query: 201 AHKKENPTWRRTY*LTFKLTINVSTILMDRAFCSIFLENKIPCLSTYKKTVSFQSLLAFY 380
           A K ++   RRT  +    +I V+T++  + F  I L+  +P  +    T     LLA  
Sbjct: 99  AFKYQDLLGRRTQVVAILYSI-VATLIYMKLFPIIILKFLVPFCTPIGATSKVLQLLAIL 157

Query: 381 LTYLKAQGIKTKWAHLPKKFAPRIYCTIFFAERNKM 488
            T   +   +T WA        RIY T+FF   + M
Sbjct: 158 RTKDASSVSRTTWALSAFTNMTRIY-TVFFQSHDWM 192


>AE014296-807|AAF47870.2|  221|Drosophila melanogaster CG1265-PB
           protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 27/96 (28%), Positives = 42/96 (43%)
 Frame = +3

Query: 201 AHKKENPTWRRTY*LTFKLTINVSTILMDRAFCSIFLENKIPCLSTYKKTVSFQSLLAFY 380
           A K ++   RRT  +    +I V+T++  + F  I L+  +P  +    T     LLA  
Sbjct: 99  AFKYQDLLGRRTQVVAILYSI-VATLIYMKLFPIIILKFLVPFCTPIGATSKVLQLLAIL 157

Query: 381 LTYLKAQGIKTKWAHLPKKFAPRIYCTIFFAERNKM 488
            T   +   +T WA        RIY T+FF   + M
Sbjct: 158 RTKDASSVSRTTWALSAFTNMTRIY-TVFFQSHDWM 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,558,498
Number of Sequences: 53049
Number of extensions: 462816
Number of successful extensions: 1193
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)