Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0400
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL023810-4|CAD59138.1| 384|Caenorhabditis elegans Hypothetical ... 30 1.2
AL008881-3|CAD59164.1| 384|Caenorhabditis elegans Hypothetical ... 30 1.2
AL008881-1|CAA15517.2| 343|Caenorhabditis elegans Hypothetical ... 30 1.2
U67956-4|AAB07693.1| 396|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 27 6.5
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical
protein W05B5.2 protein.
Length = 362
Score = 31.5 bits (68), Expect = 0.40
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = -1
Query: 218 ILFFVSTPRPVSLNTARANSFFRLTPFFLSQVFNNINSSFAPQVQKLREIF*RLFRFVRP 39
I F+S+P PV+L+ A A F R P F ++ S++ + QK ++ +F FV P
Sbjct: 169 IAMFLSSPEPVTLHLAGA-PFVR--PNFTTKWGTRCKESWSEEFQKNYQLLQTIFSFVLP 225
Query: 38 ICMM 27
+ ++
Sbjct: 226 LLVI 229
>Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 16 LLSNIIQMGRTKRKR---RQKISRSFCTCGANEELILLNTWLKKNGVRRKKELAL 171
+ S + Q TK K+ R ++ + TCG ++ +N +NG+ K+ LA+
Sbjct: 255 IFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAV 309
>Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical
protein T05A1.1b protein.
Length = 387
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 16 LLSNIIQMGRTKRKR---RQKISRSFCTCGANEELILLNTWLKKNGVRRKKELAL 171
+ S + Q TK K+ R ++ + TCG ++ +N +NG+ K+ LA+
Sbjct: 212 IFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAV 266
>Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 16 LLSNIIQMGRTKRKR---RQKISRSFCTCGANEELILLNTWLKKNGVRRKKELAL 171
+ S + Q TK K+ R ++ + TCG ++ +N +NG+ K+ LA+
Sbjct: 255 IFSRLRQRVETKLKKLSERSQLLENSTTCGTTNHIVSINAEAVQNGLENKQRLAV 309
>AL023810-4|CAD59138.1| 384|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1b protein.
Length = 384
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 124 YLIILILRLRHKCRNYVKFSDVFFVLYVPFV 32
YL +IL + K N + F+ +FF+L +PF+
Sbjct: 145 YLEQIILTIAPKLANSIVFNAIFFILLIPFL 175
>AL008881-3|CAD59164.1| 384|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1b protein.
Length = 384
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 124 YLIILILRLRHKCRNYVKFSDVFFVLYVPFV 32
YL +IL + K N + F+ +FF+L +PF+
Sbjct: 145 YLEQIILTIAPKLANSIVFNAIFFILLIPFL 175
>AL008881-1|CAA15517.2| 343|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1a protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 124 YLIILILRLRHKCRNYVKFSDVFFVLYVPFV 32
YL +IL + K N + F+ +FF+L +PF+
Sbjct: 104 YLEQIILTIAPKLANSIVFNAIFFILLIPFL 134
>U67956-4|AAB07693.1| 396|Caenorhabditis elegans Hypothetical
protein F16F9.4 protein.
Length = 396
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 378 YLTYLKAQGIKTKWAHLPKKF 440
Y LK G+ T+W H P+ F
Sbjct: 349 YANKLKKSGVSTEWRHYPRAF 369
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 531 FLIRNHHLNLXIYVAFYFVRQKIWYSIF 448
F++ LN + FYFV +KIW +F
Sbjct: 336 FMVTLMSLNRTTSIFFYFVNEKIWKFLF 363
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 251 KGKLISSSPGRILFFVSTPRPVSLNTARANS 159
+G+ +SS+P + L V P PV NT R S
Sbjct: 144 RGRPVSSTPNKRLSPVYKPSPVPKNTPRTTS 174
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 251 KGKLISSSPGRILFFVSTPRPVSLNTARANS 159
+G+ +SS+P + L V P PV NT R S
Sbjct: 144 RGRPVSSTPNKRLSPVYKPSPVPKNTPRTTS 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,599,764
Number of Sequences: 27780
Number of extensions: 259530
Number of successful extensions: 637
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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