Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0399
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0130 + 41262652-41262798,41262958-41263056,41263155-412632...    28   7.0  
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958...    28   9.2  
03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961...    28   9.2  

>01_07_0130 +
           41262652-41262798,41262958-41263056,41263155-41263220,
           41264073-41264255
          Length = 164

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -3

Query: 593 VISDTFRGFHTDRFAVNGYSIGHNYKISIYI 501
           V+SD F   +T R ++ G+S+G +  ++IY+
Sbjct: 12  VLSDNFEQLNTSRASIFGHSMGGHGALTIYL 42


>03_04_0037 +
           16694760-16695227,16695563-16695642,16695735-16695828,
           16695973-16696071,16696650-16696742,16696822-16696941,
           16697422-16697525,16697734-16697806,16698023-16698085
          Length = 397

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 689 KNKFYAYL*VSWVNDSVINAYLVLVYDSHRR 597
           K K +     +W+ND VIN YL L+ +  +R
Sbjct: 199 KEKIWCLRTCNWLNDEVINLYLELLKERAQR 229


>03_02_0969 -
           12795413-12795475,12795672-12795744,12796011-12796114,
           12796374-12796493,12796591-12796683,12797813-12797911,
           12798074-12798167,12798254-12798333,12798817-12799347
          Length = 418

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 689 KNKFYAYL*VSWVNDSVINAYLVLVYDSHRR 597
           + KF      +W+ND VIN YL L+ +   R
Sbjct: 220 REKFRCLRLTAWLNDEVINLYLELLKEREAR 250


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,284,898
Number of Sequences: 37544
Number of extensions: 255698
Number of successful extensions: 396
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)