Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0399
         (757 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p pro...    29   9.1  
AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB...    29   9.1  
AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA...    29   9.1  

>AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p
           protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 310 TPNRTNIKSLFVFVLTDNFRTWNKFKIKTHLF 215
           T N  +  ++ V +L D+FR ++K K+  HLF
Sbjct: 46  TINELSHVNIPVMLLPDDFRAYSKIKVDNHLF 77


>AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB,
           isoform B protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 310 TPNRTNIKSLFVFVLTDNFRTWNKFKIKTHLF 215
           T N  +  ++ V +L D+FR ++K K+  HLF
Sbjct: 46  TINELSHVNIPVMLLPDDFRAYSKIKVDNHLF 77


>AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA,
           isoform A protein.
          Length = 404

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 310 TPNRTNIKSLFVFVLTDNFRTWNKFKIKTHLF 215
           T N  +  ++ V +L D+FR ++K K+  HLF
Sbjct: 46  TINELSHVNIPVMLLPDDFRAYSKIKVDNHLF 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,848,191
Number of Sequences: 53049
Number of extensions: 475711
Number of successful extensions: 956
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)