Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0398
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    25   0.84 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.84 
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    25   0.84 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   1.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   7.9  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 338 KCCEHNEIMVDFVCRLAVNYNQSVWEPHFKTEDGQ-DGKVKYYNY 469
           KC +H ++ V+ V R  +    S W+      D + + + +Y +Y
Sbjct: 74  KCNDHQKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHY 118


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 713 YLFCHMKWYERWFHFPQEIGILPCKLNVPLY*MSSFMLSAI 591
           YLFC    + + F    +IGIL  +L  PL+   SFM S +
Sbjct: 72  YLFCASLSFYKAF----KIGILLNQLITPLFFFHSFMTSVL 108


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 338 KCCEHNEIMVDFVCRLAVNYNQSVWEPHFKTEDGQ-DGKVKYYNY 469
           KC +H ++ V+ V R  +    S W+      D + + + +Y +Y
Sbjct: 74  KCNDHQKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHY 118


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 398 NQSVWEPHFKTEDGQDGKV 454
           N+  WEP  KT+D  D  V
Sbjct: 146 NKMTWEPKNKTDDDDDALV 164


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +2

Query: 347 EHNEIMVDFVCRLAVNY---NQSVWEPHFKTEDGQDGKVK-YYNYTYGLPDCEATQWRQ 511
           E NE   +  C+ AV Y    +  + P+        G +  YY Y +GLP+ E + +++
Sbjct: 236 EVNERKENLTCQPAVPYVPFYRYCYRPYPVYNQWWSGPLSMYYQYPFGLPEYEYSFYQE 294


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 284 ADSDLNEISERQYAVRINKC 343
           +DS+ +E+S   Y  +I  C
Sbjct: 49  SDSENSEVSSNSYTPKIKSC 68


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -3

Query: 604 CYQRYAYDISDDVIDHQLISSIYPRNLQNLKLPPLCSLTVW 482
           CYQR  +       ++ L+ ++Y RN+ +     L  + VW
Sbjct: 38  CYQRDLFRQKITGSENCLVLNVYTRNIPDGIHTSLYPVLVW 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,298
Number of Sequences: 336
Number of extensions: 3735
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)