Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0398
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634...    33   0.31 
08_02_0192 + 14048828-14048873,14048960-14051169                       29   2.9  
11_01_0474 - 3666236-3668050                                           28   8.9  
02_01_0462 + 3332464-3332470,3333606-3335806                           28   8.9  

>08_02_0824 +
           21561699-21562415,21563294-21563362,21563424-21563459,
           21564533-21564600,21565259-21565277,21565662-21565763,
           21566173-21566288,21566501-21566595,21568093-21568264,
           21568413-21568493,21569732-21569801,21570106-21570132
          Length = 523

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -1

Query: 726 GPMPVFVLPYEMV*KMVPFSTGNRYITMQTECSTILNVLFHAISDMLMIYQM 571
           G M   +L  +   K +P + GN  I MQ+    +L  +  A+ DM+ + QM
Sbjct: 252 GYMDTVILSLKSYRKNIPITVGNFVIVMQSCIRLVLKKVMDAVLDMMQVQQM 303


>08_02_0192 + 14048828-14048873,14048960-14051169
          Length = 751

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 637 SLHGNIPISCGKWNHLSYHFIWQNKYW 717
           SLHG+ P S G  +++ +  +W+N ++
Sbjct: 244 SLHGSFPSSIGNCSNMKFLSLWENSFY 270


>11_01_0474 - 3666236-3668050
          Length = 604

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +2

Query: 350 HNEIMVDFVCRLAVNYNQSVWEPHFKTEDGQDGKVKYYNYTYGLPDCEA 496
           H+E     VC +A + +  + + H+K E  + G+   Y++ Y   D  A
Sbjct: 93  HDEGGGPLVCVVAAHRDSVLLQMHYKNEARRGGEYGLYHFVYSAGDAAA 141


>02_01_0462 + 3332464-3332470,3333606-3335806
          Length = 735

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 640 LHGNIPISCGKWNHLSYHFIWQNKY 714
           L G+IP     W HL Y F++ N +
Sbjct: 311 LTGSIPSLISNWTHLQYLFLFNNTF 335


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,155,433
Number of Sequences: 37544
Number of extensions: 355658
Number of successful extensions: 826
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)