Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0398
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025727-1|AAG23391.3|  429|Caenorhabditis elegans Hypothetical ...    32   0.37 
Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical...    28   7.9  

>AC025727-1|AAG23391.3|  429|Caenorhabditis elegans Hypothetical
           protein Y73E7A.3 protein.
          Length = 429

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = -3

Query: 451 LSILSIFGFKMWLPYTLIIVYGQSTDEVDHDLVVLTAFVYSNSVLSFGYFV 299
           +S  ++F F M++ Y+L+ V  Q T  +  +L  LTA  YS   L FG F+
Sbjct: 283 VSYFALFAFSMFIFYSLVTVVLQKTSALMFNLSTLTADFYS---LLFGIFM 330


>Z73969-8|CAA98239.1|  351|Caenorhabditis elegans Hypothetical
           protein C12D8.12 protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = -3

Query: 574 DDVIDHQLISSIYPRNLQNLKLPPLCSLTVW*SICVIVIFHLSILSIFGFKMWLPYTLII 395
           DDV    +I+  YP +    K P + +     +  ++    L ++ IFGFK +   T ++
Sbjct: 172 DDVT--YIIADFYPMHENGQKFPSIGAFISGFNFLLMTTVSLFVIFIFGFKCYYEMTRVV 229

Query: 394 VYGQS 380
           V G++
Sbjct: 230 VPGRN 234


>AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical
           protein Y73F8A.21 protein.
          Length = 703

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 592 IADSMKEDIQYSGTFSLHGNIPI 660
           +A++M E++Q++ TFS  G IP+
Sbjct: 401 LANAMSENLQFAQTFSNQGEIPL 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,677
Number of Sequences: 27780
Number of extensions: 342646
Number of successful extensions: 807
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)