Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0395
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 34 0.021
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 27 3.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 4.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 4.2
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 27 4.2
AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical... 27 4.2
AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical ... 27 4.2
AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical ... 27 4.2
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 26 5.6
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 26 5.6
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 26 5.6
Z83318-4|CAB05900.1| 145|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 26 7.4
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 26 7.4
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 25 9.7
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 25 9.7
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 25 9.7
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 25 9.7
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 25 9.7
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 25 9.7
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 25 9.7
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 34.3 bits (75), Expect = 0.021
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 7 SDK*KNKMTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST 186
S+K KN + FN N G + + P T++ ++ PP+TGR+ + P+ +
Sbjct: 286 SNKYKNNYKAPEFNNDFNGGNKFNQ--FPPRNAQSTDLSENRAAPPQTGRKTLMPTPQAP 343
Query: 187 FSHGQGDEPKATNGTS 234
F Q TNG S
Sbjct: 344 F---QNAPAPFTNGPS 356
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +1
Query: 22 NKMTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQ 201
NK F G N GA PP G S P PPR G +PP +F G+
Sbjct: 740 NKPPPPMFQQGFNAGAP------PPPFGRGAGPMSSFPPPPRGGMHHMPP--PPSFRGGR 791
Query: 202 G 204
G
Sbjct: 792 G 792
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Frame = +1
Query: 130 EPEPP---RT--GRRAVPPSATSTFSHGQG 204
+PEPP RT G RA PP+ATST+ G
Sbjct: 128 KPEPPTMPRTIQGFRAPPPAATSTYRPPHG 157
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 239 ATEVPLVAFGSSPCPWLKVLVALGGTARRPVLGGSGSE 126
+T + L GS+P ++ A GGT R P + G +
Sbjct: 347 STSISLNGIGSTPTRQFEITQAYGGTIRGPPMAIGGGQ 384
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 139 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 243
PP T R + PPSATS+ DE T G+ V T
Sbjct: 66 PPGTVRASFPPSATSSVVSDGSDE---TAGSVVVT 97
>AL032623-15|CAJ76975.1| 260|Caenorhabditis elegans Hypothetical
protein Y43F8B.1c protein.
Length = 260
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 227 PLVAFGSSPCPWLKVLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLD 75
PLV + W++ G ++ V G + ++ VWPPP STL D
Sbjct: 132 PLVVKANEDTAWIQQ--DQNGVLKQAVWGKTSRINR--VWPPPENESTLSD 178
>AL032623-2|CAD54165.1| 312|Caenorhabditis elegans Hypothetical
protein Y43F8B.1b protein.
Length = 312
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 227 PLVAFGSSPCPWLKVLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLD 75
PLV + W++ G ++ V G + ++ VWPPP STL D
Sbjct: 181 PLVVKANEDTAWIQQ--DQNGVLKQAVWGKTSRINR--VWPPPENESTLSD 227
>AL032623-1|CAA21508.2| 309|Caenorhabditis elegans Hypothetical
protein Y43F8B.1a protein.
Length = 309
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 227 PLVAFGSSPCPWLKVLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLD 75
PLV + W++ G ++ V G + ++ VWPPP STL D
Sbjct: 181 PLVVKANEDTAWIQQ--DQNGVLKQAVWGKTSRINR--VWPPPENESTLSD 227
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +1
Query: 118 IFDSEP----EPPRTGRRAVPPSATSTFSHGQGDEPKATNG 228
+F+ +P EPP T R A PP TF +E K G
Sbjct: 401 VFEKDPYEYYEPPPTKRPAPPPRFKKTFKPRSEEEKKKIIG 441
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +1
Query: 118 IFDSEP----EPPRTGRRAVPPSATSTFSHGQGDEPKATNG 228
+F+ +P EPP T R A PP TF +E K G
Sbjct: 1172 VFEKDPYEYYEPPPTKRPAPPPRFKKTFKPRSEEEKKKIIG 1212
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +1
Query: 118 IFDSEP----EPPRTGRRAVPPSATSTFSHGQGDEPKATNG 228
+F+ +P EPP T R A PP TF +E K G
Sbjct: 1169 VFEKDPYEYYEPPPTKRPAPPPRFKKTFKPRSEEEKKKIIG 1209
>Z83318-4|CAB05900.1| 145|Caenorhabditis elegans Hypothetical
protein F55B11.4 protein.
Length = 145
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 106 GHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSV 237
G I +P PP+ G AVP + + G G P++ SV
Sbjct: 91 GQGTIMRQQPPPPQIGGGAVPDNG---YHIGHGVRPRSATQASV 131
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 357 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 407
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 346 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 396
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 346 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 396
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 357 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 407
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 346 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 396
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +3
Query: 126 FRTGATEDRAPCR-----STKRNEHFQPRTRR*AESDQRHFSSDXRSVTPK 263
F +T DRAP +T N+ Q +E +QR F R++TPK
Sbjct: 346 FDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSELEQRQFERYRRALTPK 396
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 80 AGCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMS 211
AG ++ ++ TS+ + SH + P HQ A SA ++++
Sbjct: 46 AGATSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVT 89
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 201 APYGVADRAMATPNQIHRGHSAPPEHFRQ 229
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 381 APYGVADRAMATPNQIHRGHSAPPEHFRQ 409
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 453 APYGVADRAMATPNQIHRGHSAPPEHFRQ 481
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 398 APYGVADRAMATPNQIHRGHSAPPEHFRQ 426
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 453 APYGVADRAMATPNQIHRGHSAPPEHFRQ 481
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 453 APYGVADRAMATPNQIHRGHSAPPEHFRQ 481
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 92 APPVVATLTSSIPNRSHRGPGAVPFHQAQ 178
AP VA + PN+ HRG A P H Q
Sbjct: 453 APYGVADRAMATPNQIHRGHSAPPEHFRQ 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,664,942
Number of Sequences: 27780
Number of extensions: 130958
Number of successful extensions: 457
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -