Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0394
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    28   0.081
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    28   0.081
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.33 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   4.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 202 HILVDFLSKVYSSQLSIVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTL 378
           HIL +     Y  +L  ++G S +GKT L   L +        S    +     S+KTL
Sbjct: 92  HILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTL 150


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 202 HILVDFLSKVYSSQLSIVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTL 378
           HIL +     Y  +L  ++G S +GKT L   L +        S    +     S+KTL
Sbjct: 92  HILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTL 150


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 171 YLALLF*Q*PSYFGGFSLEGILFATQYCN 257
           Y++LL    P+YFG    + +L   +YCN
Sbjct: 295 YVSLLLGPHPTYFGKTGRKTVLKTNKYCN 323


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 LAYSQYRQTFTSMKENIEEYI 360
           LAY + RQ F + K+NI E+I
Sbjct: 284 LAY-KIRQVFPNEKKNISEFI 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,420
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)