Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0394
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 65 7e-11
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 44 1e-04
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 43 3e-04
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 41 0.001
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 41 0.001
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 41 0.001
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 31 1.0
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.5
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 29 5.5
U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 28 7.3
Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical pr... 28 9.6
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 28 9.6
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 64.9 bits (151), Expect = 7e-11
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLA-----YSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 414
+ +GL D GKT +F +L+ Y +T+TSM EN +K +I+D PG +RLR
Sbjct: 42 LFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKITLRIKDKEKEIIDYPGNDRLR 101
Query: 415 NKFFEQ--HKSSAKGIVFVIDSINIQKEIRDVADTY 516
K E H S IVFV+DS K RDVA+ +
Sbjct: 102 QKLIENHLHSRSLLRIVFVVDSAAFSKNARDVAELF 137
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +3
Query: 480 YTERNQRCSRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVT 659
+++ + + YT+ + + + P+LI C+KQD LAK +VI+ LEKEI L+ +
Sbjct: 126 FSKNARDVAELFYTVALENV---DKVPILIACHKQDLSLAKTEKVIRNSLEKEIGLINKS 182
Query: 660 KSNQLQSVDPSE 695
++ L D SE
Sbjct: 183 RAAALIGTDGSE 194
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 217 FLSKVYSS-QLSIVM-GLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVD 390
FLSK++ +L I+M GL +GKT + +L Q T ++ N+E N + D
Sbjct: 4 FLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWD 63
Query: 391 LPGQERLRNKFFEQHKSSAKGIVFVIDS 474
+ GQ+++R + + + + ++FV+D+
Sbjct: 64 VGGQDKIR-PLWRHYYTGTQALIFVMDA 90
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/81 (25%), Positives = 47/81 (58%)
Frame = +1
Query: 247 SIVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 426
++++GL +GKT + +L ++ T ++ N+E TL + D+ GQ+++R +
Sbjct: 20 TLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIR-ALW 78
Query: 427 EQHKSSAKGIVFVIDSINIQK 489
+ + + +VFV+DS +I++
Sbjct: 79 KYYFPNTTTLVFVVDSSDIER 99
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYR--QTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKF 423
+V+GL +SGKT + +L + R Q ++ + + T N + D+ GQ + R+ +
Sbjct: 21 VVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTW 80
Query: 424 FEQHKSSAKGIVFVIDS 474
E + S++G++FV+DS
Sbjct: 81 -ESYFHSSQGVIFVLDS 96
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + RL + T ++ N+E+ N ++ DL GQ +R ++
Sbjct: 20 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIR-PYWR 78
Query: 430 QHKSSAKGIVFVIDS 474
+ ++ I++V+DS
Sbjct: 79 CYYANTDAIIYVVDS 93
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
IV+GL ++GKT + +T ++ N+EE N I D+ GQE LR K +
Sbjct: 21 IVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLR-KSWS 79
Query: 430 QHKSSAKGIVFVIDS 474
+ ++ VIDS
Sbjct: 80 TYYVQTDVVIVVIDS 94
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 536 DHSGKHNSPSNIVQQTGPAISKRKPSYQRITRKRNKFSSCDQIESTA 676
D + + SP QQ P++ +RK +R R+R SS ++ STA
Sbjct: 303 DRTVRRRSPERRRQQRSPSVERRKSPQRRDERRRRHDSSENERRSTA 349
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEY--ITSNKTLKIV--DLPGQERLR 414
I++G + GKT L R ++ + T ++ + E + N+ L++ D GQER R
Sbjct: 104 IIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYR 163
Query: 415 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVA 507
+ + +VFV D + ++ D+A
Sbjct: 164 QSIVAHYYRNVNAVVFVYD-VTCRESFNDLA 193
>Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical
protein T13F3.1 protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 139 FCMNLFFNHFRFHCRVLSLHTH*VTKLICTL 47
FCM +F HF + + HT + KL+C L
Sbjct: 104 FCMGIFGIHFFYRYLAIYGHTEMIRKLVCIL 134
>Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical
protein C10C6.5 protein.
Length = 610
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 142 DPERSTIHNLT*PYCSSSNPHILVDFLSKVYSSQLSIVMGLSDSGKTLLFVRLAYSQYR- 318
DP T HN++ + S IL + QL +MG S +GKT L L R
Sbjct: 30 DPVTLTWHNIS-IHAEKSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLSRNLRG 88
Query: 319 -QTFTSMKENIEE 354
+T S+K N E
Sbjct: 89 LETSGSVKVNGHE 101
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -1
Query: 488 FCILIESITNTIPLALLLCCSKNLFL 411
FC+ ++S+T+ + LL C SKN+++
Sbjct: 38 FCVHMQSVTSGLSEELLFCKSKNVYI 63
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/80 (21%), Positives = 37/80 (46%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+ +GL ++GKT L L + Q ++ E+ + DL G + R + ++
Sbjct: 25 VFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR-RVWK 83
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ + +VF+ID + ++
Sbjct: 84 DYFPAVDAVVFLIDVADAER 103
>U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical
protein F36D4.4 protein.
Length = 472
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 301 AYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 417
++SQ ++F + + N+ E N T +I P + LRN
Sbjct: 356 SFSQMNKSFANTRSNVREDENGNNTAEIEVTPNEPLLRN 394
>AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein28 protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +3
Query: 453 NCVCD*FYQYTERNQRCSRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 632
N VC+ Y + N CS + T++ D ++ + K + L GS+ K L +
Sbjct: 160 NPVCNQITWYLDFNFNCSIIIITLIIDLLV-------AFVGRKHSKTLPVGSEYSKVLRK 212
Query: 633 KEINLVRVTKS 665
++ N VR T S
Sbjct: 213 RDWNFVRQTSS 223
>Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical
protein W08G11.5 protein.
Length = 305
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 488 FCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKV 321
FC ++ S+TN++ + L+L S S T F E+ Y+S+ F+E K+
Sbjct: 12 FCAIVSSLTNSVLIFLILTKSPPQLGSYKWLMLCTCF---FELAYASLDIFVEPKI 64
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+V+G + GKT + R Y+++ + KE IE+ + ++ V LP N F
Sbjct: 21 VVLGSAKVGKTNIIRRYLYNEFSSKY---KETIEDLHSREFRIQGVPLPLDILDTNFNFP 77
Query: 430 QHK------SSAKGIVFVIDSINIQKEIRDV 504
+ +SA +VF +D + KE+ D+
Sbjct: 78 DMRRLSIASASAFLLVFSVDDVTSFKEMSDI 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,526,170
Number of Sequences: 27780
Number of extensions: 396399
Number of successful extensions: 1125
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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