BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0394 (845 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 65 7e-11 AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 44 1e-04 U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 43 3e-04 Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 42 6e-04 Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 42 7e-04 U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 41 0.001 AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 41 0.001 AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 41 0.001 Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 39 0.004 AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 31 1.0 Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 31 1.4 Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical pr... 29 5.5 Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.5 U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 29 5.5 U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 28 7.3 AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 28 7.3 Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical pr... 28 9.6 U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 28 9.6 >Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical protein R186.3 protein. Length = 240 Score = 64.9 bits (151), Expect = 7e-11 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLA-----YSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLR 414 + +GL D GKT +F +L+ Y +T+TSM EN +K +I+D PG +RLR Sbjct: 42 LFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKITLRIKDKEKEIIDYPGNDRLR 101 Query: 415 NKFFEQ--HKSSAKGIVFVIDSINIQKEIRDVADTY 516 K E H S IVFV+DS K RDVA+ + Sbjct: 102 QKLIENHLHSRSLLRIVFVVDSAAFSKNARDVAELF 137 Score = 46.0 bits (104), Expect = 3e-05 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +3 Query: 480 YTERNQRCSRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVT 659 +++ + + YT+ + + + P+LI C+KQD LAK +VI+ LEKEI L+ + Sbjct: 126 FSKNARDVAELFYTVALENV---DKVPILIACHKQDLSLAKTEKVIRNSLEKEIGLINKS 182 Query: 660 KSNQLQSVDPSE 695 ++ L D SE Sbjct: 183 RAAALIGTDGSE 194 >AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical protein Y116A8C.12 protein. Length = 175 Score = 44.0 bits (99), Expect = 1e-04 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Frame = +1 Query: 217 FLSKVYSS-QLSIVM-GLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVD 390 FLSK++ +L I+M GL +GKT + +L Q T ++ N+E N + D Sbjct: 4 FLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWD 63 Query: 391 LPGQERLRNKFFEQHKSSAKGIVFVIDS 474 + GQ+++R + + + + ++FV+D+ Sbjct: 64 VGGQDKIR-PLWRHYYTGTQALIFVMDA 90 >U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation factor relatedprotein 1.1 protein. Length = 179 Score = 42.7 bits (96), Expect = 3e-04 Identities = 21/81 (25%), Positives = 47/81 (58%) Frame = +1 Query: 247 SIVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 426 ++++GL +GKT + +L ++ T ++ N+E TL + D+ GQ+++R + Sbjct: 20 TLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIR-ALW 78 Query: 427 EQHKSSAKGIVFVIDSINIQK 489 + + + +VFV+DS +I++ Sbjct: 79 KYYFPNTTTLVFVVDSSDIER 99 >Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical protein C38D4.8 protein. Length = 190 Score = 41.9 bits (94), Expect = 6e-04 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYR--QTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKF 423 +V+GL +SGKT + +L + R Q ++ + + T N + D+ GQ + R+ + Sbjct: 21 VVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTW 80 Query: 424 FEQHKSSAKGIVFVIDS 474 E + S++G++FV+DS Sbjct: 81 -ESYFHSSQGVIFVLDS 96 >Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical protein F54C9.10 protein. Length = 180 Score = 41.5 bits (93), Expect = 7e-04 Identities = 20/75 (26%), Positives = 41/75 (54%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 +++GL +GKT + RL + T ++ N+E+ N ++ DL GQ +R ++ Sbjct: 20 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIR-PYWR 78 Query: 430 QHKSSAKGIVFVIDS 474 + ++ I++V+DS Sbjct: 79 CYYANTDAIIYVVDS 93 >U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation factor relatedprotein 1.2 protein. Length = 181 Score = 41.1 bits (92), Expect = 0.001 Identities = 19/75 (25%), Positives = 42/75 (56%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 +++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R + Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79 Query: 430 QHKSSAKGIVFVIDS 474 + + +G++FV+DS Sbjct: 80 HYFQNTQGLIFVVDS 94 >AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation factor related(20.5 kD) (arf-3) protein. Length = 180 Score = 41.1 bits (92), Expect = 0.001 Identities = 19/75 (25%), Positives = 42/75 (56%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 +++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R + Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79 Query: 430 QHKSSAKGIVFVIDS 474 + + +G++FV+DS Sbjct: 80 HYFQNTQGLIFVVDS 94 >AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation factor relatedprotein 3 protein. Length = 180 Score = 41.1 bits (92), Expect = 0.001 Identities = 19/75 (25%), Positives = 42/75 (56%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 +++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R + Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79 Query: 430 QHKSSAKGIVFVIDS 474 + + +G++FV+DS Sbjct: 80 HYFQNTQGLIFVVDS 94 >Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical protein ZK632.8 protein. Length = 178 Score = 39.1 bits (87), Expect = 0.004 Identities = 24/75 (32%), Positives = 37/75 (49%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 IV+GL ++GKT + +T ++ N+EE N I D+ GQE LR K + Sbjct: 21 IVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLR-KSWS 79 Query: 430 QHKSSAKGIVFVIDS 474 + ++ VIDS Sbjct: 80 TYYVQTDVVIVVIDS 94 >AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical protein Y57A10A.19 protein. Length = 425 Score = 31.1 bits (67), Expect = 1.0 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +2 Query: 536 DHSGKHNSPSNIVQQTGPAISKRKPSYQRITRKRNKFSSCDQIESTA 676 D + + SP QQ P++ +RK +R R+R SS ++ STA Sbjct: 303 DRTVRRRSPERRRQQRSPSVERRKSPQRRDERRRRHDSSENERRSTA 349 >Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical protein F43D9.2 protein. Length = 307 Score = 30.7 bits (66), Expect = 1.4 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQ-TFTSMKENIEEY--ITSNKTLKIV--DLPGQERLR 414 I++G + GKT L R ++ + T ++ + E + N+ L++ D GQER R Sbjct: 104 IIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYR 163 Query: 415 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVA 507 + + +VFV D + ++ D+A Sbjct: 164 QSIVAHYYRNVNAVVFVYD-VTCRESFNDLA 193 >Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical protein T13F3.1 protein. Length = 346 Score = 29.5 bits (63), Expect = 3.1 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 139 FCMNLFFNHFRFHCRVLSLHTH*VTKLICTL 47 FCM +F HF + + HT + KL+C L Sbjct: 104 FCMGIFGIHFFYRYLAIYGHTEMIRKLVCIL 134 >Z83217-3|CAB05682.3| 610|Caenorhabditis elegans Hypothetical protein C10C6.5 protein. Length = 610 Score = 28.7 bits (61), Expect = 5.5 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +1 Query: 142 DPERSTIHNLT*PYCSSSNPHILVDFLSKVYSSQLSIVMGLSDSGKTLLFVRLAYSQYR- 318 DP T HN++ + S IL + QL +MG S +GKT L L R Sbjct: 30 DPVTLTWHNIS-IHAEKSGKQILENVSGIAKPGQLLALMGASGAGKTTLLNMLLSRNLRG 88 Query: 319 -QTFTSMKENIEE 354 +T S+K N E Sbjct: 89 LETSGSVKVNGHE 101 >Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical protein C34F6.3 protein. Length = 283 Score = 28.7 bits (61), Expect = 5.5 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -1 Query: 488 FCILIESITNTIPLALLLCCSKNLFL 411 FC+ ++S+T+ + LL C SKN+++ Sbjct: 38 FCVHMQSVTSGLSEELLFCKSKNVYI 63 >U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical protein ZK180.4 protein. Length = 193 Score = 28.7 bits (61), Expect = 5.5 Identities = 17/80 (21%), Positives = 37/80 (46%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 + +GL ++GKT L L + Q ++ E+ + DL G + R + ++ Sbjct: 25 VFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR-RVWK 83 Query: 430 QHKSSAKGIVFVIDSINIQK 489 + + +VF+ID + ++ Sbjct: 84 DYFPAVDAVVFLIDVADAER 103 >U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical protein F36D4.4 protein. Length = 472 Score = 28.3 bits (60), Expect = 7.3 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 301 AYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRN 417 ++SQ ++F + + N+ E N T +I P + LRN Sbjct: 356 SFSQMNKSFANTRSNVREDENGNNTAEIEVTPNEPLLRN 394 >AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine receptor, class x protein28 protein. Length = 298 Score = 28.3 bits (60), Expect = 7.3 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +3 Query: 453 NCVCD*FYQYTERNQRCSRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 632 N VC+ Y + N CS + T++ D ++ + K + L GS+ K L + Sbjct: 160 NPVCNQITWYLDFNFNCSIIIITLIIDLLV-------AFVGRKHSKTLPVGSEYSKVLRK 212 Query: 633 KEINLVRVTKS 665 ++ N VR T S Sbjct: 213 RDWNFVRQTSS 223 >Z92817-5|CAE17970.2| 305|Caenorhabditis elegans Hypothetical protein W08G11.5 protein. Length = 305 Score = 27.9 bits (59), Expect = 9.6 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 488 FCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKV 321 FC ++ S+TN++ + L+L S S T F E+ Y+S+ F+E K+ Sbjct: 12 FCAIVSSLTNSVLIFLILTKSPPQLGSYKWLMLCTCF---FELAYASLDIFVEPKI 64 >U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific family, class rprotein 2 protein. Length = 332 Score = 27.9 bits (59), Expect = 9.6 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Frame = +1 Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429 +V+G + GKT + R Y+++ + KE IE+ + ++ V LP N F Sbjct: 21 VVLGSAKVGKTNIIRRYLYNEFSSKY---KETIEDLHSREFRIQGVPLPLDILDTNFNFP 77 Query: 430 QHK------SSAKGIVFVIDSINIQKEIRDV 504 + +SA +VF +D + KE+ D+ Sbjct: 78 DMRRLSIASASAFLLVFSVDDVTSFKEMSDI 108 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,526,170 Number of Sequences: 27780 Number of extensions: 396399 Number of successful extensions: 1125 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1124 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2098003600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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