Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0394
(845 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05670.2 68418.m00624 expressed protein 50 3e-06
At5g05670.1 68418.m00623 expressed protein 50 3e-06
At2g18770.1 68415.m02185 expressed protein 50 3e-06
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 47 2e-05
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 45 6e-05
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 44 1e-04
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 44 1e-04
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 42 7e-04
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 41 9e-04
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 41 9e-04
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 41 9e-04
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 41 9e-04
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 41 9e-04
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 41 9e-04
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 41 9e-04
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 41 9e-04
At3g52000.1 68416.m05704 serine carboxypeptidase S10 family prot... 30 2.2
At1g57680.2 68414.m06546 expressed protein 30 2.2
At1g57680.1 68414.m06545 expressed protein 30 2.2
At2g30140.1 68415.m03668 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.9
At5g57580.1 68418.m07194 calmodulin-binding protein similar to c... 29 3.9
At2g32290.1 68415.m03947 beta-amylase, putative / 1,4-alpha-D-gl... 29 5.1
At1g48900.1 68414.m05478 signal recognition particle 54 kDa prot... 29 5.1
At3g44060.1 68416.m04720 F-box family protein contains F-box dom... 28 6.8
At2g29090.1 68415.m03536 cytochrome P450 family protein similar ... 28 6.8
At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes f... 28 6.8
At5g47110.1 68418.m05808 lil3 protein, putative similar to Lil3 ... 28 9.0
At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 28 9.0
At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 28 9.0
At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 28 9.0
>At5g05670.2 68418.m00624 expressed protein
Length = 260
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Frame = +1
Query: 238 SQLSIVMGLSDSGKTLLFVRLAY-SQYRQTFTSMKENIEEYITSNKTLK--------IVD 390
S ++ GL+ SGKT+LF +L S ++ T TSM+ N ++ ++ K +VD
Sbjct: 56 SNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVD 115
Query: 391 LPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVADTYTQSCVIRSFRETQLPF*Y 570
+PG RLR K E+ A IVFV+D++ R ++ + + + ++P
Sbjct: 116 VPGHSRLRPK-LEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLL 174
Query: 571 CATNRT 588
C N+T
Sbjct: 175 CC-NKT 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 504 SRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 665
S YLY IL + + P+L+ CNK D+ A + I+ +EKEI +R ++S
Sbjct: 153 SEYLYEILTNANVVKKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRASRS 206
>At5g05670.1 68418.m00623 expressed protein
Length = 260
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Frame = +1
Query: 238 SQLSIVMGLSDSGKTLLFVRLAY-SQYRQTFTSMKENIEEYITSNKTLK--------IVD 390
S ++ GL+ SGKT+LF +L S ++ T TSM+ N ++ ++ K +VD
Sbjct: 56 SNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVD 115
Query: 391 LPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVADTYTQSCVIRSFRETQLPF*Y 570
+PG RLR K E+ A IVFV+D++ R ++ + + + ++P
Sbjct: 116 VPGHSRLRPK-LEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLL 174
Query: 571 CATNRT 588
C N+T
Sbjct: 175 CC-NKT 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 504 SRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 665
S YLY IL + + P+L+ CNK D+ A + I+ +EKEI +R ++S
Sbjct: 153 SEYLYEILTNANVVKKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRASRS 206
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 49.6 bits (113), Expect = 3e-06
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Frame = +1
Query: 238 SQLSIVMGLSDSGKTLLFVRLA-YSQYRQTFTSMKENIEEYITSN---------KTLKIV 387
S ++ GLS SGKT+LF +L S ++ TSM+ N ++ N K + ++
Sbjct: 55 SNTVLLSGLSGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLI 114
Query: 388 DLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVADTYTQSCVIRSFRETQLPF* 567
D+PG RL +K E++ A +VFV+D++ IR ++ S + + P
Sbjct: 115 DVPGHSRLISK-LEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVL 173
Query: 568 YCATNRTSH*QKEAKLSKDYSKKK 639
C N+T K +K++ +K+
Sbjct: 174 LCC-NKT---DKVTAHTKEFIRKQ 193
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 504 SRYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 665
S YLY IL + + N TP+L+ CNK D+ A + I+ +EKEI+ +RV++S
Sbjct: 153 SEYLYDILTNASVIKNKTPVLLCCNKTDKVTAHTKEFIRKQMEKEIDKLRVSRS 206
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+V+GL ++GKT +L + T ++ N+EE + N ++ DL GQ+RLR +
Sbjct: 21 VVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWAT 80
Query: 430 QHKSSAKGIVFVIDS 474
++ + ++ VIDS
Sbjct: 81 YYRGT-HAVIVVIDS 94
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/80 (27%), Positives = 45/80 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL SGKT + +L + T ++ N+E + D+ GQE++R K +
Sbjct: 21 LMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIR-KLWR 79
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ +A+G++FV+DS + ++
Sbjct: 80 HYFQNAQGLIFVVDSSDSER 99
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/80 (25%), Positives = 46/80 (57%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 21 VMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLWR 79
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ ++ G+++V+DS++ ++
Sbjct: 80 HYFNNTDGLIYVVDSLDRER 99
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/80 (25%), Positives = 46/80 (57%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 21 VMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLR-PLWR 79
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ ++ G+++V+DS++ ++
Sbjct: 80 HYFNNTDGLIYVVDSLDRER 99
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 223 SKVYSS-QLSIVM-GLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLP 396
SK+++ ++ I+M GL +GKT + +L + T ++ N+E N + + D+
Sbjct: 10 SKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVG 69
Query: 397 GQERLRNKFFEQHKSSAKGIVFVIDS 474
GQ+++R + + + +G++FV+DS
Sbjct: 70 GQDKIR-PLWRHYFQNTQGLIFVVDS 94
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+V+GL ++GKT + RL + T ++ N+E +N ++ DL GQ +R ++
Sbjct: 21 LVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIR-PYWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + + +++V+DS
Sbjct: 80 CYFPNTQAVIYVVDS 94
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+++GL +GKT + +L + T ++ N+E N + + D+ GQ+++R +
Sbjct: 21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR-PLWR 79
Query: 430 QHKSSAKGIVFVIDS 474
+ + +G++FV+DS
Sbjct: 80 HYFQNTQGLIFVVDS 94
>At3g52000.1 68416.m05704 serine carboxypeptidase S10 family protein
similar to SP|P52711 Serine carboxypeptidase II-3
precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam
profile PF0450 serine carboxypeptidase
Length = 482
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 480 YTERNQRCSRYLYTILCDPIIQGNTTPLLILCN 578
Y N+ R+LY + I GNTTPL+I N
Sbjct: 82 YVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFN 114
>At1g57680.2 68414.m06546 expressed protein
Length = 362
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 479 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKVCL 315
LI S+++ +PL +++ C LS+ IF L + + S+F F V +CL
Sbjct: 240 LIFSVSSFLPLRIVMLC-----LSVLTAADKIIFEALSFLAFLSLFCFCVVSICL 289
>At1g57680.1 68414.m06545 expressed protein
Length = 362
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 479 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFIEVKVCL 315
LI S+++ +PL +++ C LS+ IF L + + S+F F V +CL
Sbjct: 240 LIFSVSSFLPLRIVMLC-----LSVLTAADKIIFEALSFLAFLSLFCFCVVSICL 289
>At2g30140.1 68415.m03668 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 597 AKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNIGVV 713
A+ +++KGL E + + V + +L+ + EG++GVV
Sbjct: 285 AQMEEIVKGLRESGVRFLWVARGGELKLKEALEGSLGVV 323
>At5g57580.1 68418.m07194 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 647
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 104 ESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFW----WIFSRRYTL 238
ES VVKE+ P+L Y+TL + L+F WI SR++ L
Sbjct: 166 ESHVVKERSGKRPLLTGEVYVTLKEGVGTLGELVFTDNSSWIRSRKFRL 214
>At2g32290.1 68415.m03947 beta-amylase, putative /
1,4-alpha-D-glucan maltohydrolase, putative similar to
beta-amylase GI:13560977 from [Castanea crenata]
Length = 577
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 193 SNPHILVDFLSKVYSSQLSIVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNK 372
SNP I F + ++ + LS +L R A YR S +EN+E++I+S
Sbjct: 183 SNPDI---FYTNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGV 239
Query: 373 TLKI 384
+ I
Sbjct: 240 IIDI 243
>At1g48900.1 68414.m05478 signal recognition particle 54 kDa protein
3 / SRP54 (SRP-54C) identical to SP|P49967 Signal
recognition particle 54 kDa protein 3 (SRP54)
{Arabidopsis thaliana}
Length = 495
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 340 ENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKG-----IVFVIDSINIQKEIRDV 504
E ++ + N L IVD G+ + FE+ + A+ ++FV+DS +I + D
Sbjct: 174 EGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDS-SIGQAAFDQ 232
Query: 505 ADTYTQSCVI 534
A + QS +
Sbjct: 233 AQAFKQSVAV 242
>At3g44060.1 68416.m04720 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 479 LIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSS 348
LI I N L L CS +S+ C G +FN L+E+++SS
Sbjct: 271 LIREICNV--KTLHLTCSTVEVISVYCKGGLPMFNNLVELVFSS 312
>At2g29090.1 68415.m03536 cytochrome P450 family protein similar to
Cytochrome P450 88A3 (SP:O23051) [Arabidopsis thaliana];
similar to taxane 13-alpha-hydroxylase (GI:17148242)
[Taxus cuspidata].
Length = 482
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 149 NDPRYITLLSLIVLAVTLIFWWIFSRRYTLR 241
++P ITL ++V+ V L WW+ + LR
Sbjct: 18 DEPALITLTIVVVVVVLLFKWWLHWKEQRLR 48
>At1g31150.1 68414.m03811 expressed protein EST gb|Z33866 comes from
this gene
Length = 673
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 110 EVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRNSV 250
E +K K+H NDP Y+TL L + WI + LRN +
Sbjct: 404 EKIKAKVHVGGESNDPGYVTLAYLNDMKE-----WILKQNQDLRNKI 445
>At5g47110.1 68418.m05808 lil3 protein, putative similar to Lil3
protein [Arabidopsis thaliana] gi|4741966|gb|AAD28780
Length = 258
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 DLVSVKRKNST-MESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFSRRYTLRN 244
DL ++ T +S +V E + + ++P + L+V ++I WW + +RY L
Sbjct: 110 DLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPE 169
Query: 245 SVL 253
+ L
Sbjct: 170 AEL 172
>At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to
SP:O04834 GTP-binding protein SAR1A. [Arabidopsis
thaliana]
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+ +GL ++GKT L L + Q + EE K DL G + + + ++
Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVWK 82
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ + +V+++D+ + ++
Sbjct: 83 DYYAKVDAVVYLVDAYDKER 102
>At3g62560.1 68416.m07028 GTP-binding protein, putative similar to
GTP-binding protein SAR1A (SP:O04834) [Arabidopsis
thaliana]; small GTP-binding protein Bsar1a - Brassica
campestris, EMBL:U55035
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+ +GL ++GKT L L + Q + EE K DL G + + + ++
Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVWK 82
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ + +V+++D+ + ++
Sbjct: 83 DYYAKVDAVVYLVDAYDKER 102
>At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to
GTP-binding protein (SAR1B) [Arabidopsis thaliana]
SP:Q01474
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +1
Query: 250 IVMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFE 429
+ +GL ++GKT L L + Q + EE K DL G + + + ++
Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVWK 82
Query: 430 QHKSSAKGIVFVIDSINIQK 489
+ + +V+++D+ + ++
Sbjct: 83 DYYAKVDAVVYLVDAYDKER 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,284,303
Number of Sequences: 28952
Number of extensions: 359498
Number of successful extensions: 1075
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -