BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0393 (845 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 29 0.061 EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 25 0.75 EF222288-1|ABN79648.1| 73|Tribolium castaneum adipokinetic hor... 23 4.0 AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 23 4.0 AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 23 4.0 AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 22 5.3 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 7.0 >Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor 5-like protein protein. Length = 162 Score = 28.7 bits (61), Expect = 0.061 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = +3 Query: 96 DEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNI 257 D+ + S E KNG++DEG W + S + R + A +N ++ Sbjct: 96 DQNESLEASVNENSKNGDDDEGHEWQADVSEEAVRARMQDLTEGAKNMTINDDL 149 >EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein 90 protein. Length = 721 Score = 25.0 bits (52), Expect = 0.75 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +3 Query: 93 ADEEKKN-NGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAHYYNMNHNIVVW 266 A+EEKK G ++ K ED G+ + ++ K E+Y +N +W Sbjct: 228 AEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIW 286 >EF222288-1|ABN79648.1| 73|Tribolium castaneum adipokinetic hormone 1 protein. Length = 73 Score = 22.6 bits (46), Expect = 4.0 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 Query: 537 IIWFIMSVFGYNIPNSP 487 +I+ I+ V +NIPNSP Sbjct: 51 LIYKIIQVSFFNIPNSP 67 >AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 22.6 bits (46), Expect = 4.0 Identities = 7/29 (24%), Positives = 14/29 (48%) Frame = +3 Query: 159 GDAWGSHGSSQGRRYAKMPVERYAHYYNM 245 G++W H + GR + + + +NM Sbjct: 426 GNSWFEHETESGRNFGAAHADDVPYIFNM 454 >AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 22.6 bits (46), Expect = 4.0 Identities = 7/29 (24%), Positives = 14/29 (48%) Frame = +3 Query: 159 GDAWGSHGSSQGRRYAKMPVERYAHYYNM 245 G++W H + GR + + + +NM Sbjct: 426 GNSWFEHETESGRNFGAAHADDVPYIFNM 454 >AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor candidate 31 protein. Length = 250 Score = 22.2 bits (45), Expect = 5.3 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 Query: 475 SNQQTIIICVIHFRYLLYISVDIFSS 398 SN+Q V H YI+V IF S Sbjct: 34 SNKQLQFFAVEHLLIQCYIAVSIFGS 59 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 21.8 bits (44), Expect = 7.0 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 668 LRLHPTESQFMLTF*LCSQRYQV 736 +++ PT ++ L LC RYQV Sbjct: 1443 VQIGPTVEKYTLEKLLCGTRYQV 1465 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 206,563 Number of Sequences: 336 Number of extensions: 4702 Number of successful extensions: 13 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 23348025 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -