Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0392
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.70 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.93 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.7  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   8.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 131 KLLELREGGPSCAEGKSGNGSSTFLSEPIIK 39
           KL + R+G  +  + KS  GS+T+L E ++K
Sbjct: 436 KLKKPRQGDGAAVKRKSREGSTTYLWEFLLK 466


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 296 RNAAHFDSSVQRFYSKC 246
           R+  HFD    RFY+ C
Sbjct: 458 RDKGHFDDGTTRFYTAC 474


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 82  DLPSAQDGPPSLSSKS 129
           ++P ++DGPPS+S  S
Sbjct: 122 EVPESRDGPPSVSLSS 137


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -1

Query: 472 LDTALELLTLFTQFRLDVFDTFFCFNSIAMDDHLTLAVSKSQLLRFLFG 326
           L  AL +L++FT   L +   FF  +    D  + + V    +   L G
Sbjct: 52  LGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLG 100


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -1

Query: 472 LDTALELLTLFTQFRLDVFDTFFCFNSIAMDDHLTLAVSKSQLLRFLFG 326
           L  AL +L++FT   L +   FF  +    D  + + V    +   L G
Sbjct: 52  LGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLG 100


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 596 VRNSVNINA*RRRLPKQQ 649
           + N  NIN  RR+L K+Q
Sbjct: 16  LENEFNINRPRRKLSKKQ 33


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -1

Query: 472 LDTALELLTLFTQFRLDVFDTFFCFNSIAMDDHLTLAVSKSQLLRFLFG 326
           L  AL +L++FT   L +   FF  +    D  + + V    +   L G
Sbjct: 52  LGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLG 100


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 330 NKKRRSWDLETAKVKWSSMAMELKQKNVSKTSSLNCVNRVNNSRAVSKK 476
           NKK R+  L+T    W S      +    KT  ++ V   +N+  V  K
Sbjct: 52  NKKYRALRLDTGNFSWGS------ECTTRKTRIIDVVYNASNNELVRTK 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,856
Number of Sequences: 438
Number of extensions: 3453
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)