Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0391
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31351-1|AAB97618.1|  810|Drosophila melanogaster protein ( Dros...    29   9.5  
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro...    29   9.5  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   9.5  
AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p pro...    29   9.5  
AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adapti...    29   9.5  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   9.5  

>U31351-1|AAB97618.1|  810|Drosophila melanogaster protein (
           Drosophila melanogastergarnet mRNA, complete cds. ).
          Length = 810

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 391 YYYLFVCILHIW*LCPLDVARFQLIVPFTNSLFRSCLLIIH 269
           Y Y+++C  + +  C      F ++V    SL+R CLL+IH
Sbjct: 117 YIYIYICYRYCYRCCCHCQLLFAIVVVQCLSLYR-CLLLIH 156


>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +2

Query: 422 ECPDGCAVRRIEYRLHKMAAANTKWRTRETTRCCSLYSSRLLTATRSRTQYHSCHQSQKP 601
           ECP  C V  + +   K A     +R + + + C    S++L   + +T+  + +    P
Sbjct: 532 ECPGSCIVSLLSFTCFKNAEMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPP 591


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +2

Query: 422 ECPDGCAVRRIEYRLHKMAAANTKWRTRETTRCCSLYSSRLLTATRSRTQYHSCHQSQKP 601
           ECP  C V  + +   K A     +R + + + C    S++L   + +T+  + +    P
Sbjct: 532 ECPGSCIVSLLSFTCFKNAEMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPP 591


>AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p
           protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +2

Query: 422 ECPDGCAVRRIEYRLHKMAAANTKWRTRETTRCCSLYSSRLLTATRSRTQYHSCHQSQKP 601
           ECP  C V  + +   K A     +R + + + C    S++L   + +T+  + +    P
Sbjct: 66  ECPGSCIVSLLSFTCFKNAEMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPP 125


>AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adaptin
           subunit of AP-3 protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 391 YYYLFVCILHIW*LCPLDVARFQLIVPFTNSLFRSCLLIIH 269
           Y Y+++C  + +  C      F ++V    SL+R CLL+IH
Sbjct: 117 YIYIYICYRYCYRCCCHCQLLFAIVVVQCLSLYR-CLLLIH 156


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +2

Query: 422 ECPDGCAVRRIEYRLHKMAAANTKWRTRETTRCCSLYSSRLLTATRSRTQYHSCHQSQKP 601
           ECP  C V  + +   K A     +R + + + C    S++L   + +T+  + +    P
Sbjct: 532 ECPGSCIVSLLSFTCFKNAEMTDLFRCKRSGQICCAPKSKILEKQQFQTRNDTAYYPAPP 591


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,471,832
Number of Sequences: 53049
Number of extensions: 566846
Number of successful extensions: 1000
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)