Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0391
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              25   1.0  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              24   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.2  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.7  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -1

Query: 380 ICLYSSHLVAVSSGCGSIPTYCTFH*FTLQELLIDNSQGKI 258
           +C+ +  L  + SG  ++ + C     T Q+++ D ++GKI
Sbjct: 12  VCVSAMTLDELKSGLHTVQSVCMKEIGTAQQIIDDINEGKI 52


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +2

Query: 425 CPDGCAVRRIEYRLHKMAAANTKWRTRETTRCCSLYSSRLLTATRSRTQYHSCHQSQK 598
           C   C ++++ +          K+R R TT+  S   +RL+   +  T+ +SC +S K
Sbjct: 61  CYVDCMLKKVGFVNADTTFNEEKFRER-TTKLDSEQVNRLVNNCKDITESNSCKKSSK 117


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +3

Query: 438 VQCVA*NTAYTRWPP----RTQNGGREKQR 515
           +QC   N + TRWP      T  G R++Q+
Sbjct: 769 LQCATSNYSTTRWPATSVITTTTGARQQQQ 798


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 175 SSHRVNVKVTFVRKSEN 225
           S HR+N+K + V  SEN
Sbjct: 76  SYHRINLKCSLVEFSEN 92


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 345 LWMWLDSNLLYLS 307
           LW++ D  LLY+S
Sbjct: 112 LWLYHDKTLLYMS 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,890
Number of Sequences: 438
Number of extensions: 3399
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)