Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0389
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   4.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -3

Query: 319  SSTDSISKL*RHTTTSRATCSLRELQVPRLVGNNASLVQNLQQAFVLKPKTNLHIHWS 146
            ++T  + K+   + +S ++    ++ +  L  NN+S    +    V+  + NLH H S
Sbjct: 860  TATGGMLKMPPSSNSSPSSYPSPDVVISGLASNNSSSSNLVAAGMVINDENNLHYHRS 917


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 128  RRRLQTTATNTARPKAIIADRHPSTNSESGARSVTRSPLI 9
            R R   TAT T + +   A RH     E   RS  +S LI
Sbjct: 1794 RHRSLVTATKTRKKQQTEAIRHAMLQQEDKQRSERQSFLI 1833


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 504  SAFTIYNPNRLVNS 463
            SAF + NPN+L+N+
Sbjct: 2844 SAFIVTNPNQLINT 2857


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,964
Number of Sequences: 2352
Number of extensions: 13169
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)