BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0389
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060836-1|AAH60836.2| 706|Homo sapiens frizzled homolog 6 (Dro... 31 6.1
AF363578-8|AAL50384.1| 706|Homo sapiens frizzled-like protein 6... 31 6.1
AF072873-1|AAD41637.1| 706|Homo sapiens frizzled 6 protein. 31 6.1
AB065702-1|BAC05925.1| 706|Homo sapiens seven transmembrane hel... 31 6.1
AB012911-1|BAA25686.1| 706|Homo sapiens Frizzled-6 protein. 31 6.1
>BC060836-1|AAH60836.2| 706|Homo sapiens frizzled homolog 6
(Drosophila) protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 347 SENLGTEE--TIFHGQHIKAVTSHNYVACHLLVEGASGAKTGWKQCVAGTKSSTSFRFKT 174
S+++GT T HG A+TSH+Y+ L E + +T ++ A S+ R +
Sbjct: 555 SKSMGTSTGATANHGTSAVAITSHDYLGQETLTEIQTSPETSMREVKADGASTPRLREQD 614
Query: 173 EDEP 162
EP
Sbjct: 615 CGEP 618
>AF363578-8|AAL50384.1| 706|Homo sapiens frizzled-like protein 6
protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 347 SENLGTEE--TIFHGQHIKAVTSHNYVACHLLVEGASGAKTGWKQCVAGTKSSTSFRFKT 174
S+++GT T HG A+TSH+Y+ L E + +T ++ A S+ R +
Sbjct: 555 SKSMGTSTGATANHGTSAVAITSHDYLGQETLTEIQTSPETSMREVKADGASTPRLREQD 614
Query: 173 EDEP 162
EP
Sbjct: 615 CGEP 618
>AF072873-1|AAD41637.1| 706|Homo sapiens frizzled 6 protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 347 SENLGTEE--TIFHGQHIKAVTSHNYVACHLLVEGASGAKTGWKQCVAGTKSSTSFRFKT 174
S+++GT T HG A+TSH+Y+ L E + +T ++ A S+ R +
Sbjct: 555 SKSMGTSTGATANHGTSAVAITSHDYLGQETLTEIQTSPETSMREVKADGASTPRLREQD 614
Query: 173 EDEP 162
EP
Sbjct: 615 CGEP 618
>AB065702-1|BAC05925.1| 706|Homo sapiens seven transmembrane helix
receptor protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 347 SENLGTEE--TIFHGQHIKAVTSHNYVACHLLVEGASGAKTGWKQCVAGTKSSTSFRFKT 174
S+++GT T HG A+TSH+Y+ L E + +T ++ A S+ R +
Sbjct: 555 SKSMGTSTGATANHGTSAVAITSHDYLGQETLTEIQTSPETSMREVKADGASTPRLREQD 614
Query: 173 EDEP 162
EP
Sbjct: 615 CGEP 618
>AB012911-1|BAA25686.1| 706|Homo sapiens Frizzled-6 protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 347 SENLGTEE--TIFHGQHIKAVTSHNYVACHLLVEGASGAKTGWKQCVAGTKSSTSFRFKT 174
S+++GT T HG A+TSH+Y+ L E + +T ++ A S+ R +
Sbjct: 555 SKSMGTSTGATANHGTSAVAITSHDYLGQETLTEIQTSPETSMREVKADGASTPRLREQD 614
Query: 173 EDEP 162
EP
Sbjct: 615 CGEP 618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,873,284
Number of Sequences: 237096
Number of extensions: 1819974
Number of successful extensions: 2779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2779
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -