Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0388
(844 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 164 9e-43
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 25 0.57
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 25 0.57
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.75
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.99
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.99
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.99
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.99
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.99
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 3.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 5.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.3
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 164 bits (398), Expect = 9e-43
Identities = 78/84 (92%), Positives = 84/84 (100%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 434
T+PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEALQA
Sbjct: 58 TNPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQA 117
Query: 435 GADISMIGQFGVGFYSSYLVADRV 506
GADISMIGQFGVGFYS+YLVAD+V
Sbjct: 118 GADISMIGQFGVGFYSAYLVADKV 141
Score = 102 bits (244), Expect = 4e-24
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = +1
Query: 79 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
MPEE Q +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL
Sbjct: 1 MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 57
Score = 89.4 bits (212), Expect = 3e-20
Identities = 43/64 (67%), Positives = 46/64 (71%)
Frame = +2
Query: 509 VHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXX 688
V SK+NDDEQYVWESSAGGSFTV D GEPLGRGTKIVLH+KED EF+
Sbjct: 143 VVSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVKK 202
Query: 689 XSQF 700
SQF
Sbjct: 203 HSQF 206
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 712 PIKLMVEKEREKELSDD 762
PIKL+VEKEREKELSDD
Sbjct: 210 PIKLVVEKEREKELSDD 226
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.57
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 117 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 1
F R+LCL F+ +F Y +++ ++ + G ++ Q A Y
Sbjct: 75 FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 115
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 25.4 bits (53), Expect = 0.57
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 117 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 1
F R+LCL F+ +F Y +++ ++ + G ++ Q A Y
Sbjct: 31 FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 71
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -1
Query: 658 FHEFCQVLFDVKDDLCTSTKGLTAVWADCERASCRR 551
+H L + K C G W +C++A+C +
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.99
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 569 FTVRPDSGEPLGRGTKIVL 625
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.99
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 569 FTVRPDSGEPLGRGTKIVL 625
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.99
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 569 FTVRPDSGEPLGRGTKIVL 625
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.99
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 569 FTVRPDSGEPLGRGTKIVL 625
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.99
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 569 FTVRPDSGEPLGRGTKIVL 625
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 378 CSPNRPWSYQYRYR 337
C P RPW Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 215 HQHAWIWLVWLLSQ 228
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 443 HQHDWTVRCWLLLQ 484
HQH W WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,263
Number of Sequences: 336
Number of extensions: 3950
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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