Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0388
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 139 2e-33
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 139 2e-33
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 139 2e-33
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 138 4e-33
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 101 6e-22
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 101 6e-22
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 96 2e-20
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 96 2e-20
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 93 2e-19
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 31 1.3
At2g39200.1 68415.m04815 seven transmembrane MLO family protein ... 29 2.9
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 28 8.9
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 139 bits (337), Expect = 2e-33
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 434
TD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL A
Sbjct: 52 TDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 111
Query: 435 GADISMIGQFGVGFYSSYLVADRV 506
GAD+SMIGQFGVGFYS+YLVAD+V
Sbjct: 112 GADVSMIGQFGVGFYSAYLVADKV 135
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +1
Query: 106 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 509 VHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 685
V +KHNDDEQYVWES AGGSFTV R SGE LGRGTK+VL++KED E++
Sbjct: 137 VTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVK 196
Query: 686 XXSQFHRLTQSS*WLKKNAKK 748
S+F S W++K +K
Sbjct: 197 KHSEFISYPISL-WIEKTIEK 216
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 139 bits (337), Expect = 2e-33
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 434
TD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL A
Sbjct: 52 TDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 111
Query: 435 GADISMIGQFGVGFYSSYLVADRV 506
GAD+SMIGQFGVGFYS+YLVAD+V
Sbjct: 112 GADVSMIGQFGVGFYSAYLVADKV 135
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +1
Query: 106 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 509 VHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 685
V +KHNDDEQYVWES AGGSFTV R SGE LGRGTK+VL++KED E++
Sbjct: 137 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVK 196
Query: 686 XXSQFHRLTQSS*WLKKNAKK 748
S+F S W++K +K
Sbjct: 197 KHSEFISYPISL-WIEKTIEK 216
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 139 bits (337), Expect = 2e-33
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 434
TD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL A
Sbjct: 52 TDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 111
Query: 435 GADISMIGQFGVGFYSSYLVADRV 506
GAD+SMIGQFGVGFYS+YLVAD+V
Sbjct: 112 GADVSMIGQFGVGFYSAYLVADKV 135
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +1
Query: 106 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 51
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 509 VHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 685
V +KHNDDEQYVWES AGGSFTV R SGE LGRGTK++L++KED E++
Sbjct: 137 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMILYLKEDQMEYIEERRLKDLVK 196
Query: 686 XXSQFHRLTQSS*WLKKNAKK 748
S+F S W++K +K
Sbjct: 197 KHSEFISYPISL-WIEKTIEK 216
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 138 bits (334), Expect = 4e-33
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 434
TD SKLD EL+I+++P+K+ TL+IID+GIGMTKADLVNNLGTIA+SGTK FMEALQA
Sbjct: 57 TDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQA 116
Query: 435 GADISMIGQFGVGFYSSYLVADRV 506
GAD+SMIGQFGVGFYS+YLVA++V
Sbjct: 117 GADVSMIGQFGVGFYSAYLVAEKV 140
Score = 94.3 bits (224), Expect = 9e-20
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +1
Query: 94 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
+ Q A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESL
Sbjct: 3 DVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESL 56
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +2
Query: 509 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFM 655
V +KHNDDEQYVWES AGGSFTV D GEPLGRGTKI L +K+D E++
Sbjct: 142 VTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYL 191
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 101 bits (242), Expect = 6e-22
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ- 431
T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL+
Sbjct: 124 TEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKE 183
Query: 432 ---AGADISMIGQFGVGFYSSYLVADRV 506
GAD +IGQFGVGFYS++LVA++V
Sbjct: 184 NKDLGADNGLIGQFGVGFYSAFLVAEKV 211
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +1
Query: 85 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSV 123
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +2
Query: 530 DEQYVWESSA-GGSFTVR--PDSGEPLGRGTKIVLHVKED 640
D+QYVWES A S+ +R D L RGT+I L+++ED
Sbjct: 221 DKQYVWESVADSSSYLIREETDPDNILRRGTQITLYLRED 260
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 101 bits (242), Expect = 6e-22
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ- 431
T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL+
Sbjct: 124 TEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKE 183
Query: 432 ---AGADISMIGQFGVGFYSSYLVADRV 506
GAD +IGQFGVGFYS++LVA++V
Sbjct: 184 NKDLGADNGLIGQFGVGFYSAFLVAEKV 211
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +1
Query: 85 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSV 123
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +2
Query: 530 DEQYVWESSA-GGSFTVR--PDSGEPLGRGTKIVLHVKED 640
D+QYVWES A S+ +R D L RGT+I L+++ED
Sbjct: 221 DKQYVWESVADSSSYLIREETDPDNILRRGTQITLYLRED 260
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 TDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 428
TD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +
Sbjct: 124 TDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM 183
Query: 429 QAGADISMIGQFGVGFYSSYLVADRV 506
Q+ D+++IGQFGVGFYS+YLVAD +
Sbjct: 184 QSSGDLNLIGQFGVGFYSAYLVADYI 209
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +1
Query: 94 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +L
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLAL 123
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 506 DVHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFM 655
+V SKHNDD QYVWES A G F V D+ EPLGRGT+I LH++++ E++
Sbjct: 210 EVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYL 260
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 TDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 428
TD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +
Sbjct: 124 TDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM 183
Query: 429 QAGADISMIGQFGVGFYSSYLVADRV 506
Q+ D+++IGQFGVGFYS+YLVAD +
Sbjct: 184 QSSGDLNLIGQFGVGFYSAYLVADYI 209
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +1
Query: 94 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +L
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLAL 123
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 506 DVHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFM 655
+V SKHNDD QYVWES A G F V D+ EPLGRGT+I LH++++ E++
Sbjct: 210 EVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYL 260
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ- 431
T+P +L I+I +K G +T+ D+GIGMT+ +LV+ LGTIA+SGT FM+AL+
Sbjct: 142 TNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKALKD 201
Query: 432 ---AGADISMIGQFGVGFYSSYLVADRV 506
AG D ++IGQFGVGFYS++LVADRV
Sbjct: 202 SKDAGGDNNLIGQFGVGFYSAFLVADRV 229
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +1
Query: 103 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESL 255
P E F +QAE+++LM LI+N+ YSNKE+FLRELISN+SDALDK+RY S+
Sbjct: 91 PPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSV 141
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 530 DEQYVWESSAGGS-FTVRPDSGEP--LGRGTKIVLHVKEDLAEFMXXXXXXXXXXXXSQF 700
D+QYVWE A S FT++ D+ + RGT+I LH+K++ F SQF
Sbjct: 239 DKQYVWEGEANSSSFTIQEDTDPQSLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQF 298
>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 733
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 583 RQR*APWSRYKDRPSRQRGLGRIHGRTQNQRDRKETFPVSSANPIKLMVEKEREKEL 753
R R R +DR +R R R +++R+E ++ +VE+E+EKEL
Sbjct: 104 RDRDRDRERERDRERDRRERDREPDRRNREKEREEEVKAREKARVEKLVEREKEKEL 160
>At2g39200.1 68415.m04815 seven transmembrane MLO family protein /
MLO-like protein 12 (MLO12) identical to SP|O80961
MLO-like protein 12 (AtMlo12) {Arabidopsis thaliana},
membrane protein Mlo12 [Arabidopsis thaliana]
gi|14091594|gb|AAK53805; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 576
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 506 DVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEF 652
D S+++ ++ + +S S + D P+ +IV HVK DL+EF
Sbjct: 524 DPESQNHSYQREITDSEFSNSHHPQVDMASPVREEKEIVEHVKVDLSEF 572
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 130 QAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 252
++E+ + S + +TF S+ +++LR I + D+ D RY+S
Sbjct: 259 ESELMGMFSPLWHTFESSLQVYLRSSIDGAEDSYDG-RYDS 298
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,103,143
Number of Sequences: 28952
Number of extensions: 379396
Number of successful extensions: 1054
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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