Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0384
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   3.3  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   5.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 18/77 (23%), Positives = 33/77 (42%)
 Frame = +2

Query: 71  PKDVGNSTTSVTPRMAGLRQGSSTKAIPHLTAVSKDRNFGSGKLSAPSLTWLWLFRRRAV 250
           P+DV     ++   M+G+    ST   P L  +  ++   + KL  P+    W  ++   
Sbjct: 318 PEDVLIIIYTILTYMSGVFYYLSTTVNPLLYNIMSNKFREAFKLMLPNCCGKWSSQKSEP 377

Query: 251 XSRAFGWLLKVGRSFFK 301
               +  LL+  RS F+
Sbjct: 378 RRSIYSSLLRYPRSIFR 394


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 57  LLQRSLKTLEIVPLLLLHGWPGSVRGV 137
           L+Q+ LK  +   +  LHG PG + G+
Sbjct: 318 LIQKHLKIHDTCGVHNLHGMPGILGGI 344


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 347 QGGDWGS 367
           QGGDWGS
Sbjct: 1   QGGDWGS 7


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,992
Number of Sequences: 438
Number of extensions: 3756
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)