Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0383
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1015 + 23307700-23307906,23309274-23309483,23309915-233100...   100   1e-21
04_04_1339 + 32760424-32760584,32762428-32764462                       33   0.31 
12_02_1048 + 25675563-25675760,25676995-25677051,25677132-256773...    29   5.1  
02_01_0519 - 3748415-3748432,3749010-3749041,3749474-3749606,374...    28   6.7  
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915...    28   8.9  

>07_03_1015 +
           23307700-23307906,23309274-23309483,23309915-23310085,
           23310163-23310286,23310753-23310814,23311185-23311266,
           23311870-23312009
          Length = 331

 Score =  100 bits (240), Expect = 1e-21
 Identities = 45/75 (60%), Positives = 53/75 (70%)
 Frame = +3

Query: 510 PNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGKLCVSVLXGV 689
           PNCPGII P +CKIGIMP  +HK G +G+VSRSGTLTYEA  QTT  GLG+     + G 
Sbjct: 157 PNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGD 216

Query: 690 PSTGQTFIDCLEVFL 734
           P  G  F+DCLE F+
Sbjct: 217 PFNGTNFVDCLEKFV 231



 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = +1

Query: 256 GVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCIT 435
           GV+PKK GTEHLG PVF +V EAKA T A ASVIYVPPP             + L+VCIT
Sbjct: 72  GVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCIT 131

Query: 436 EGVXQHDMVRVKHALLRQNK 495
           EG+ QHDMV+VK AL +Q+K
Sbjct: 132 EGIPQHDMVKVKAALNKQSK 151



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +2

Query: 152 LILTSETKVIVQGFTGKQGTFHSQQALDYGTKVV 253
           + +   T+VI QG TGK GTFH++QA++YGT +V
Sbjct: 37  VFVDKSTRVICQGITGKNGTFHTEQAIEYGTTMV 70


>04_04_1339 + 32760424-32760584,32762428-32764462
          Length = 731

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 14  FPFRRFTFNNSTMAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNL 154
           F  RR   N ST  M V +L    DGL  G++  A+G P+A+ ++ L
Sbjct: 550 FGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCL 596


>12_02_1048 +
           25675563-25675760,25676995-25677051,25677132-25677331,
           25677412-25677541,25677642-25677845,25678017-25678088,
           25678379-25678546
          Length = 342

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 131 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVEECHQRR 274
           Y E   N+I+T+  +  +QGF  K   F  +Q+ D   K VE   + R
Sbjct: 71  YLEAGANIIITASYQATIQGFESK--GFSKEQSEDLLAKSVEIAREAR 116


>02_01_0519 -
           3748415-3748432,3749010-3749041,3749474-3749606,
           3749702-3749765,3749948-3750010,3750101-3750243,
           3750358-3750495,3750570-3750691,3750798-3750963,
           3751058-3751180,3751325-3751396,3751484-3751591,
           3752730-3752846,3752953-3753040,3753162-3753253,
           3753378-3753490,3753994-3754127,3754209-3754564,
           3754649-3754861
          Length = 764

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 534 PEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGKLCVSVLXGVPSTG 701
           P K     + A V  +    V   +G ++ +ACHQ +I GL K+      G  ++G
Sbjct: 604 PGKANSSSIAAVVASQDWPEVTKYAGLISVQACHQESIQGLFKVQDDPERGTTTSG 659


>07_03_0699 +
           20772415-20773450,20789050-20789606,20790971-20791567,
           20792258-20792413
          Length = 781

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +3

Query: 549 IGIMPAAVHKRGC-IGVVSRSGTLTYEACHQTTITGLGKLCVSVLXGVPSTGQTFIDCLE 725
           I + PAA H  GC +GV S   T    A H     G  +L   +    PS   T   CL+
Sbjct: 154 IAVAPAARHGAGCLLGVTSNGNT----ALHLVASRGHAELAALIRVRAPSLVATRNRCLD 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,159,998
Number of Sequences: 37544
Number of extensions: 394276
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)