Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0381
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FCD1 Cluster: Putative uncharacterized protein precur...    37   0.40 
UniRef50_Q8AAX3 Cluster: Alpha-glucosidase; n=3; Bacteroides|Rep...    35   1.6  
UniRef50_A5TT97 Cluster: Possible transcriptional regulator; n=3...    35   2.1  
UniRef50_A5FFN3 Cluster: Putative uncharacterized protein precur...    35   2.1  
UniRef50_Q9HW88 Cluster: Putative uncharacterized protein; n=7; ...    34   2.8  
UniRef50_Q6IHQ8 Cluster: HDC01541; n=1; Drosophila melanogaster|...    34   3.7  
UniRef50_A7MRS9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q98BD7 Cluster: Mll5622 protein; n=1; Mesorhizobium lot...    33   6.5  
UniRef50_A5FVJ2 Cluster: Chromosome segregation protein SMC; n=1...    33   8.6  

>UniRef50_A5FCD1 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 166

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PLWGQVPREYPDDEYYYAPKIQYYYD 211
           P WG  P+ Y DD YYY P I  YYD
Sbjct: 31  PSWG--PQGYDDDRYYYLPDIDVYYD 54


>UniRef50_Q8AAX3 Cluster: Alpha-glucosidase; n=3; Bacteroides|Rep:
           Alpha-glucosidase - Bacteroides thetaiotaomicron
          Length = 748

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +2

Query: 86  ISYLIVQVKTYPMQGWPLWGQVPREYPDDEYYYAPKIQYYYDAPAVNVPEMHDQVQSPII 265
           I Y+I Q K     GWPL   +   +P+D+  +    +YY+    +  P M+ + +  I 
Sbjct: 615 IPYIIEQSKLAVESGWPLLQALILHHPEDKLCWHIDDEYYFGNDFLVAPVMNSENRRDIY 674

Query: 266 TT--QVLNIYKTKHLKG---MKSVWLP 331
               Q +N +  + L+G   +K V++P
Sbjct: 675 LPEGQWVNFFTGERLQGGRWLKEVYVP 701


>UniRef50_A5TT97 Cluster: Possible transcriptional regulator; n=3;
           Bacteria|Rep: Possible transcriptional regulator -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 312

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 25/82 (30%), Positives = 38/82 (46%)
 Frame = +2

Query: 110 KTYPMQGWPLWGQVPREYPDDEYYYAPKIQYYYDAPAVNVPEMHDQVQSPIITTQVLNIY 289
           K+YP+    L   +P E  + +     K+  YY  P +N       +   I+  +VLNI 
Sbjct: 98  KSYPLLYKKLLATLPDEQKE-KILKLLKVVEYYTIPPINPTNYLTIILEAILDLKVLNIL 156

Query: 290 KTKHLKGMKSVWLPYLLVKKLG 355
            T+H K  K + LPY L  + G
Sbjct: 157 YTQHNKISKQI-LPYNLFYRNG 177


>UniRef50_A5FFN3 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 171

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +2

Query: 134 PLWGQVPREYPDDEYYYAPKIQYYYDAPA 220
           P WG  P  Y + EYYY P I+ YYD  A
Sbjct: 33  PAWG--PAGYSEMEYYYLPDIEAYYDVRA 59


>UniRef50_Q9HW88 Cluster: Putative uncharacterized protein; n=7;
           Pseudomonas|Rep: Putative uncharacterized protein -
           Pseudomonas aeruginosa
          Length = 333

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = -1

Query: 241 VHLRNIYSGSIVVILYLRSVVIFIIGVLPRYLSPQRPSLHWVCLNLHYQVA 89
           V L  ++ G++++I YL  V+ F   VL R     R  LHW    LH+++A
Sbjct: 154 VFLVGLFVGAVMLIRYLHQVIRFNGRVLARLGVSSRKRLHWGRKILHFRIA 204


>UniRef50_Q6IHQ8 Cluster: HDC01541; n=1; Drosophila
           melanogaster|Rep: HDC01541 - Drosophila melanogaster
           (Fruit fly)
          Length = 106

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = +2

Query: 173 EYYYAPKIQYYYDAPAVNVPEMHDQVQSPIITTQVLNIYKTKHLKGMKSVWLPYLLVKKL 352
           E+  +  +QYY   P    P     +  PI+   +  +  T+H +G ++V + +LL+   
Sbjct: 13  EHIQSHILQYYSSLPPRRCPH----ILFPILAVAIPRMPATRHRRGGQAVDMVWLLLPMT 68

Query: 353 GSKAMLHPAGSQVKLM--MSVQLSLTI 427
            S++++  A + + LM  MS+Q + T+
Sbjct: 69  MSRSLMLAAAAVLVLMMLMSIQCAFTV 95


>UniRef50_A7MRS9 Cluster: Putative uncharacterized protein; n=1;
           Vibrio harveyi ATCC BAA-1116|Rep: Putative
           uncharacterized protein - Vibrio harveyi ATCC BAA-1116
          Length = 896

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/69 (23%), Positives = 30/69 (43%)
 Frame = +2

Query: 98  IVQVKTYPMQGWPLWGQVPREYPDDEYYYAPKIQYYYDAPAVNVPEMHDQVQSPIITTQV 277
           +++++ Y  +  P WG +     D +YY+AP ++   DA        H   Q+       
Sbjct: 338 LIRIEVYDPESEPSWGNLQL---DMKYYFAPLVKSEADAQGATYTSTHIDAQANNANVAT 394

Query: 278 LNIYKTKHL 304
            N+ + K L
Sbjct: 395 FNLQQAKQL 403


>UniRef50_Q98BD7 Cluster: Mll5622 protein; n=1; Mesorhizobium
           loti|Rep: Mll5622 protein - Rhizobium loti
           (Mesorhizobium loti)
          Length = 1360

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 178 LLRS*DTILLRCSRCKCS*DARPSPIPYYYDPSAQYLQNEAPQRHEERLAALPIGQETWF 357
           L RS +T+  R  + +    ARP+P  Y  DP     +   P       AA P GQ+ W+
Sbjct: 26  LNRSLETLEQRLGQTREEVTARPAPRQYGTDPRYPATEPRYPAVDPRYPAAQPTGQQRWY 85

Query: 358 E 360
           E
Sbjct: 86  E 86


>UniRef50_A5FVJ2 Cluster: Chromosome segregation protein SMC; n=1;
           Acidiphilium cryptum JF-5|Rep: Chromosome segregation
           protein SMC - Acidiphilium cryptum (strain JF-5)
          Length = 1165

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +1

Query: 277 AQYLQNEAPQRHEERLAALPIGQETWFESDATPRWQSSEVDDVS----AAFLDNLILTQM 444
           AQ+ + EA   H E+L    +G+ET  ++DA P  ++ E D  +    A  L   I  ++
Sbjct: 251 AQFAEAEAAVGHAEKLRDDVLGRET-SQNDALPALRAREADTRTRLERARILAEQIDAEI 309

Query: 445 AQ-DAQRRRENARAAFLPVDY 504
           A+ +A RR   AR A L  D+
Sbjct: 310 ARLEAARREAEARVATLRKDH 330


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,987,286
Number of Sequences: 1657284
Number of extensions: 12578847
Number of successful extensions: 34503
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34479
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)