Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0381
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 123 CKDGL--CGDKYLGSTPMMNITTLLRYNITTML 215
           C +GL  C  KY  STP+  ITT+L+   + +L
Sbjct: 51  CIEGLRDCPRKY--STPLAKITTILQRYCSVLL 81


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 123 CKDGL--CGDKYLGSTPMMNITTLLRYNITTML 215
           C +GL  C  KY  STP+  ITT+L+   + +L
Sbjct: 47  CIEGLRDCPRKY--STPLAKITTILQRYCSVLL 77


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 247 SPIPYYYDPSAQYLQN 294
           +P+P  +DP + ++QN
Sbjct: 466 TPVPLRFDPGSLFVQN 481


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = -3

Query: 254 IGLGRASQEHLQREHRSNIVS*ERSNIHHR 165
           IG+GR+  +++++ +  + +  +R  + HR
Sbjct: 607 IGIGRSPDQNVKKINLKHALDLDRQGLLHR 636


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,997
Number of Sequences: 336
Number of extensions: 3192
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)