Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0381
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197...    29   3.5  
11_01_0637 + 5104904-5105131,5105222-5105309,5105483-5106288           29   4.6  
10_08_1018 + 22298098-22298691                                         29   4.6  
08_02_1449 - 27174451-27178005                                         28   6.0  
04_03_0848 + 20261635-20261668,20261824-20261824,20261861-202619...    28   6.0  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    28   6.0  
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099...    28   8.0  

>06_01_0267 -
           1972988-1973148,1973275-1973403,1973881-1974024,
           1974368-1974493,1974595-1974720,1975149-1975241,
           1975465-1975606,1976747-1976878,1976943-1977080,
           1977431-1977523,1978186-1978389,1978568-1978656,
           1978839-1978988,1979088-1979253,1979355-1979576,
           1979687-1979872,1980289-1980411,1980511-1980611,
           1982005-1982155
          Length = 891

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = +1

Query: 286 LQNEAPQRHEERLAALPIGQETWFESDATPRW-------QSSEVDDVSAAFLDNLILTQM 444
           L+NE  + H+E L ++ I +E W     +P+         SSEV +V     +  +L Q 
Sbjct: 463 LENEKAKYHQEYLDSIKILEEKWKIHQQSPKKLIKETEPTSSEVGEVQNLLQNEKVLRQS 522

Query: 445 AQDAQRRREN 474
           A+D     +N
Sbjct: 523 AEDEANDLKN 532


>11_01_0637 + 5104904-5105131,5105222-5105309,5105483-5106288
          Length = 373

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 116 YPMQGWPLWGQVPREYPDDEYYYAPKIQYYYDAPAVNV 229
           YP+    L G +      D+YYYAPK     DA A+ +
Sbjct: 228 YPLTAGMLHGTLYWYLKGDQYYYAPKCATTADAHAITL 265


>10_08_1018 + 22298098-22298691
          Length = 197

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 211 CSRCKCS*DARPSPIPYYYDPSAQYLQNEAPQR 309
           C  C+   DA P+P P + DP+A  +  E  +R
Sbjct: 161 CPVCRSDLDAAPAPAPRHEDPAAVAVDVECDRR 193


>08_02_1449 - 27174451-27178005
          Length = 1184

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 346 ETWFESDATPRWQSSEVDDVSAAFLDNL 429
           E W   D  P WQS  ++ +S + LDNL
Sbjct: 797 ECWRCKDLPPLWQSVSLESLSLSRLDNL 824


>04_03_0848 +
           20261635-20261668,20261824-20261824,20261861-20261924,
           20262647-20262739,20262818-20262926,20263212-20263261,
           20263335-20263425,20263660-20263730,20263979-20264077,
           20264241-20264307,20264507-20264592
          Length = 254

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 146 QVPREYPDDEY--YYAPKIQYYYDAPAVNVPEMHDQVQSPIITTQVL-NIYKTKHLKGMK 316
           ++P E PD+EY  Y+AP   Y      VN+  ++ +     I  QV+ ++   +H  G++
Sbjct: 144 ELPNEIPDNEYIKYFAP--DYTLKVSNVNMDNLNSKSYLSSIKVQVMESLRAIQHAPGVQ 201

Query: 317 SVWLP 331
              +P
Sbjct: 202 MQEVP 206


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 459 LCVLSHLREYQIVKESCTDIINFT*LPAGCS 367
           +C +SH   +Q+++++  +I      PAGCS
Sbjct: 128 ICFVSHSPSFQVLRDALEEIFVLCFSPAGCS 158


>08_02_0021 +
           11307795-11308093,11308454-11308556,11309623-11309931,
           11310190-11310618
          Length = 379

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 335 LLVKKLGSKAMLHPAGSQVKLMMSVQLSLTI*YSRRWLKTHR 460
           L+  K   +  L P GS+++  +   +SLT+ Y+  WL + R
Sbjct: 45  LMTSKAKKRRCLDPEGSKIQRPVVSSISLTLSYTLPWLASLR 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,304,885
Number of Sequences: 37544
Number of extensions: 352342
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)