Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0380
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    25   0.79 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.79 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.79 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.7  

>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 414 HTTVCIKEAYSIWIHQVILQMD 479
           H  +   +AY +W  Q+I ++D
Sbjct: 52  HLFIVTHQAYELWFKQIIYELD 73


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 414 HTTVCIKEAYSIWIHQVILQMD 479
           H  +   +AY +W  Q+I ++D
Sbjct: 52  HLFIVTHQAYELWFKQIIYELD 73


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 414 HTTVCIKEAYSIWIHQVILQMD 479
           H  +   +AY +W  Q+I ++D
Sbjct: 52  HLFIVTHQAYELWFKQIIYELD 73


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 229  LSCWFSGGKICLFVFVTHSSK-YFGWLKKKNN 137
            LS W  GG   L+  + H  K    W++  NN
Sbjct: 1511 LSAWSDGGCPMLYFVIEHKKKTSTEWIQVSNN 1542


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +3

Query: 81   GNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWV 182
            G+W  + G +A    +P  ++ +FN       W+
Sbjct: 2517 GHWDKQTGHVAPLYYYPGDVYDYFNANFSLNYWI 2550


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 597  NCTKYVTYYYXGIPS 641
            NC KY   YY  +PS
Sbjct: 1000 NCLKYGVIYYVTVPS 1014


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 597  NCTKYVTYYYXGIPS 641
            NC KY   YY  +PS
Sbjct: 1000 NCLKYGVIYYVTVPS 1014


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 573 HP*N*NIINCTKYVTYYYXGIPSYGNHSW 659
           HP + N IN   YV  Y    P+Y ++ +
Sbjct: 365 HPNSENYINHQNYVQGYQGEHPNYNHYGY 393


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 573 HP*N*NIINCTKYVTYYYXGIPSYGNHSW 659
           HP + N IN   YV  Y    P+Y ++ +
Sbjct: 313 HPNSENYINHQNYVQGYQGEHPNYNHYGY 341


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 270 CFFLISVLIFESLLYHVG 217
           C FL  ++I  +L+ HVG
Sbjct: 671 CHFLFHIVIGMNLIIHVG 688


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 477 PSVKLPDESKLNKLP 433
           P V  PD  KL K+P
Sbjct: 711 PQVTCPDNMKLEKVP 725


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 119 HIISCWIVLFFQPTKIF*RMGNKYKKT 199
           +II+ + VL+   + +  +MGN Y +T
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYART 248


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 119 HIISCWIVLFFQPTKIF*RMGNKYKKT 199
           +II+ + VL+   + +  +MGN Y +T
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYART 248


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 119 HIISCWIVLFFQPTKIF*RMGNKYKKT 199
           +II+ + VL+   + +  +MGN Y +T
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYART 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,701
Number of Sequences: 336
Number of extensions: 3487
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)