Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0380
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical...    49   3e-06
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    28   7.4  
AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine re...    28   7.4  
Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical p...    27   9.8  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical
           protein Y53F4B.14 protein.
          Length = 90

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +3

Query: 78  MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWV 182
           MG WKLE GR  +  +FPVG F+ FNQP  F+E++
Sbjct: 1   MGGWKLETGRFLLLITFPVGAFWLFNQPTIFKEFM 35


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 129 PVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDRE 233
           P G  FF N    F  W TN  +  +P  N ++ +
Sbjct: 571 PFGSNFFNNNYNSFNNWYTNKNKNYYPYSNSNNNK 605


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
           protein C52B9.8 protein.
          Length = 1336

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 162 KYFEEWVTNTKRQIFPPENQHDREAIQKLIQ 254
           K  ++++TN  ++I   E ++++  IQKLIQ
Sbjct: 218 KSMQQYITNENKRIAREEMKNEKNRIQKLIQ 248


>AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine
           receptor, class w protein8 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 107 DGYVHIISCWIVLFFQPTKIF*RMGNKYKKTNLPTRKPT 223
           DGY+ ++ C++ +    T IF     K ++ NL   K T
Sbjct: 222 DGYIAMVVCFLYIIVAGTLIFQLQKAKQRRKNLKAEKST 260


>Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical
           protein C54D10.6 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 213 ENQHDREAIQKLIQI*GRNKCKVWN 287
           EN  DRE+I+K++       C +WN
Sbjct: 160 ENVEDRESIEKIVDNWRNAPCDIWN 184


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 133 LDCSFFSTNQNILKNG*QIQKDKSSHQKTNMIEKRFKN 246
           + CSF  + + IL+     + DK +H K N  ++ FKN
Sbjct: 18  VSCSFTKSGKQILQQ--IFEGDKDNHTKFNKFQELFKN 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,714
Number of Sequences: 27780
Number of extensions: 312275
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)