Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0380
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g32670.1 68417.m04651 expressed protein ; expression supporte...    31   0.97 
At3g28010.1 68416.m03497 hypothetical protein contains Pfam prof...    28   6.8  
At3g44880.1 68416.m04835 Rieske [2Fe-2S] domain-containing prote...    27   9.0  
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea...    27   9.0  
At1g59580.2 68414.m06701 mitogen-activated protein kinase, putat...    27   9.0  
At1g59580.1 68414.m06700 mitogen-activated protein kinase, putat...    27   9.0  

>At4g32670.1 68417.m04651 expressed protein ; expression supported
           by MPSS
          Length = 808

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 13/65 (20%), Positives = 33/65 (50%)
 Frame = -3

Query: 348 YLITFDNKN*IILFINLVHLDSRLCICFFLISVLIFESLLYHVGFLVGRFVFLYLLPILQ 169
           ++++F  K+  + F+NL      LCI   ++  +I +   + +GF + R +++    +  
Sbjct: 548 FMLSFGLKHDGLYFLNLASHVFLLCIMLLILKPIILDLCAFWIGFCILRGIYIITCFVYD 607

Query: 168 NILVG 154
           + + G
Sbjct: 608 HFITG 612


>At3g28010.1 68416.m03497 hypothetical protein contains Pfam profile
           PF03778: Protein of unknown function (DUF321)
          Length = 261

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 287 IPDFAFVSSSYLY*FLNRFSIMLVFWWEDLSF 192
           I  F F   +Y + FL   S + VFWW++  F
Sbjct: 220 ITGFGFWRENYEFTFLAEKSRVYVFWWKNYEF 251


>At3g44880.1 68416.m04835 Rieske [2Fe-2S] domain-containing protein
           similar to lethal leaf-spot 1 from Zea mays
           [gi:1935909]; contains Pfam PF00355 Rieske [2Fe-2S]
           domain
          Length = 537

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 73  KLWVIGN*KWVGWLCT 120
           KL ++GN KWV W+C+
Sbjct: 311 KLPIVGNQKWVIWICS 326


>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
           family protein contains Pfam profile:PF00560 Leucine
           Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
           protein kinase domain; Pfam profile:PF00400 WD domain,
           G-beta repeat (7 copies)
          Length = 407

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 76  LWVIGN*KWVGWLCTHHFLLDCSFFSTNQNILKNG 180
           LW IGN  W   L  H   + C  FS +  +L +G
Sbjct: 97  LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASG 131


>At1g59580.2 68414.m06701 mitogen-activated protein kinase, putative
           / MAPK, putative (MPK2) identical to mitogen-activated
           protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
           SWISS-PROT:Q39022; PMID:12119167
          Length = 376

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 400 SIH*NSNEIIVIIKVHNVFNN 338
           S++  SNE + I K+HNVF N
Sbjct: 49  SVNRESNERVAIKKIHNVFEN 69


>At1g59580.1 68414.m06700 mitogen-activated protein kinase, putative
           / MAPK, putative (MPK2) identical to mitogen-activated
           protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
           SWISS-PROT:Q39022; PMID:12119167
          Length = 376

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 400 SIH*NSNEIIVIIKVHNVFNN 338
           S++  SNE + I K+HNVF N
Sbjct: 49  SVNRESNERVAIKKIHNVFEN 69


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,874,400
Number of Sequences: 28952
Number of extensions: 277249
Number of successful extensions: 551
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)