Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0379
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 192 3e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 192 3e-49
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 5e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 5e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0) 93 3e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 73 4e-13
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 68 1e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 1e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 1e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 38 0.013
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 33 0.38
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.88
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.7
SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 3.6
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 3.6
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.6
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 4.7
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7) 29 6.2
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 8.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 28 8.2
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 28 8.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 192 bits (468), Expect = 3e-49
Identities = 96/130 (73%), Positives = 98/130 (75%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAI 613
REKMTQIMF FN+PAMYVAIQAVL P PHAI
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
Query: 614 LRLDLAGRDL 643
LRLDLAGRDL
Sbjct: 176 LRLDLAGRDL 185
Score = 114 bits (275), Expect = 7e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 192 bits (468), Expect = 3e-49
Identities = 96/130 (73%), Positives = 98/130 (75%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAI 613
REKMTQIMF FN+PAMYVAIQAVL P PHAI
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 175
Query: 614 LRLDLAGRDL 643
LRLDLAGRDL
Sbjct: 176 LRLDLAGRDL 185
Score = 116 bits (278), Expect = 3e-26
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 192 bits (468), Expect = 3e-49
Identities = 96/130 (73%), Positives = 98/130 (75%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAI 613
REKMTQIMF FN+PAMYVAIQAVL P PHAI
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
Query: 614 LRLDLAGRDL 643
LRLDLAGRDL
Sbjct: 177 LRLDLAGRDL 186
Score = 122 bits (293), Expect = 5e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 191 bits (466), Expect = 5e-49
Identities = 95/130 (73%), Positives = 98/130 (75%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAI 613
REKMTQIMF FN+PAMYVAIQAVL P PHAI
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI 176
Query: 614 LRLDLAGRDL 643
+RLDLAGRDL
Sbjct: 177 IRLDLAGRDL 186
Score = 117 bits (282), Expect = 1e-26
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 178 bits (433), Expect = 5e-45
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVL 508
REKMTQIMF FN+PAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVL 141
Score = 117 bits (282), Expect = 1e-26
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/31 (83%), Positives = 28/31 (90%), Gaps = 2/31 (6%)
Frame = +1
Query: 511 LYASGRTTGIVLDXGDGVSHTVPIYE--GYA 597
LYASGRTTGIV+D GDGVSHTVPIYE GY+
Sbjct: 143 LYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 116 bits (278), Expect = 3e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 68.5 bits (160), Expect = 6e-12
Identities = 39/79 (49%), Positives = 43/79 (54%)
Frame = +1
Query: 511 LYASGRTTGIVLDXGDGVSHTVPIYEGYALPPRHPASGLXXXXXXXXXXXXXLNERRANS 690
LYASGRTTGIV+D GDGV+HTVPIYEGYALP H L + R S
Sbjct: 105 LYASGRTTGIVMDSGDGVTHTVPIYEGYALP--HAIIRLDLAGRDLTDYLMKILTERGYS 162
Query: 691 FNNNGRTGKFVRDIKGXSC 747
F + VRDIK C
Sbjct: 163 FTTTAER-EIVRDIKEKLC 180
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/71 (45%), Positives = 36/71 (50%)
Frame = +2
Query: 431 NREKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
N + M +IMF FN+PAMYVAIQAVL P PHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 611 ILRLDLAGRDL 643
I+RLDLAGRDL
Sbjct: 138 IIRLDLAGRDL 148
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 105 bits (252), Expect = 4e-23
Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 385
S + G + L+ +EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATV 562
VLLTE PLNP NREKM ++MF + +Y+AIQAVL + ++ V + V
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 563 SPTPCPSTRDTHFPHAILRLDLAGRDL 643
+ CP PH RLD+AGRD+
Sbjct: 164 THI-CPVYEGFALPHLTRRLDIAGRDI 189
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 93.1 bits (221), Expect = 3e-19
Identities = 49/102 (48%), Positives = 60/102 (58%)
Frame = +2
Query: 338 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRCT 517
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MF FN P MYVA+QAV+
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 518 RPVVPPVSCWTXATVSPTPCPSTRDTHFPHAILRLDLAGRDL 643
+ + P PHA R+DLAGRDL
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDL 2230
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +2
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVS 565
+HPVLLTEAPLNP+ NREK ++ F FN PA+++++QAVL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 566 PTPCPSTRDTHFPHAILRLDLAGRDLHR 649
P PH+I+R D+AGRD+ R
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/79 (49%), Positives = 41/79 (51%)
Frame = +1
Query: 511 LYASGRTTGIVLDXGDGVSHTVPIYEGYALPPRHPASGLXXXXXXXXXXXXXLNERRANS 690
LYASGRTTG+V D GDGVSH VPIYEGYALP H L L R S
Sbjct: 21 LYASGRTTGVVFDSGDGVSHNVPIYEGYALP--HAILRLDLAGRDLTDYLMKLMTERGYS 78
Query: 691 FNNNGRTGKFVRDIKGXSC 747
F + VRDIK C
Sbjct: 79 FTTTAER-EIVRDIKEKLC 96
Score = 48.4 bits (110), Expect = 7e-06
Identities = 30/64 (46%), Positives = 33/64 (51%)
Frame = +2
Query: 452 IMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAILRLDLA 631
IMF FN+PA+YVAIQAVL + P PHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 632 GRDL 643
GRDL
Sbjct: 61 GRDL 64
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 1e-09
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXFNT 475
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MF +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 476 PAMYVAIQAVL 508
PA ++ +VL
Sbjct: 63 PAFFLCKNSVL 73
Score = 33.9 bits (74), Expect = 0.17
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 514 YASGRTTGIVLDXGDGVSHTVPIYEGYAL 600
+A+GR+ G+V+D G + VP+++GY L
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 227
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 511 LYASGRTTGIVLDXGDGVSHTVPIYEGYALPPRHPASGL-XXXXXXXXXXXXXLNERRAN 687
LYASG T G+ L G + IYEG+ L H L L ++R +
Sbjct: 772 LYASGMTLGVCLSSGFSCTQAAVIYEGHTL--NHTLQTLEIGGHHLTENLKQYLRDQRGH 829
Query: 688 SFNNNGRTGKFVRDIKGXSC 747
+F ++ + V DIK C
Sbjct: 830 NFTSSS-GWQIVNDIKEKIC 848
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 403
+EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 532 TGIVLDXGDGVSHTVPI 582
TG V+D GDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 209 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 93
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 532 TGIVLDXGDGVSHTVPIYEGYAL 600
TG V+D GDGV+H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 382
GR G + GL N+ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 383 EEHPVLLTEAPLNPKANRE 439
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 456 CSXHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +2
Query: 362 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVP--P 535
N L++ PE + VL + LN AN + A V A P VP P
Sbjct: 157 NTLKITPENY-VLTNKQTLNLIANNALLVNTASPHTAHRAFIVTTCASTSTESPAVPVKP 215
Query: 536 VSCWTXATVSPTPCPST 586
S T A +PTP P T
Sbjct: 216 ASTPTFAKNAPTPIPLT 232
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 179 VPLDRGKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 352
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 353 TFYN 364
T N
Sbjct: 497 TCPN 500
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 412 SPQPQGQQREDDPDHVRXIQHARHVRRHPSR 504
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNE 367
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 459 SXHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
S S R P T+PS PC V S Y AG
Sbjct: 492 SGSSAREPSTAPSLPCDLVAATSAKMYLAG 521
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 318 VTIPCSMGYLRVRIPLLLCASFLHKSPSVP 229
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_24603| Best HMM Match : GatB_Yqey (HMM E-Value=0.7)
Length = 984
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAGLR 554
R P T+PS PC V S Y AG R
Sbjct: 532 REPSTAPSLPCDLVAATSARMYLAGQR 558
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 390 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASFL--HKSPSVPYRPS 217
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 216 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 124
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = -1
Query: 474 VLNXSNMIWVIFSLLALGLRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG 295
VL N ++++F +LGL A + T C T +L + ++++SQ+ + C +
Sbjct: 44 VLLAPNAMFMVFLFYSLGLAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVS 102
Query: 294 YLRVRIPLLLCASFL 250
R +LL ASF+
Sbjct: 103 VARCFASMLLTASFI 117
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC+ V S Y AG
Sbjct: 821 REPSTAPSMPCNLVAATSARMYLAG 845
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,416,440
Number of Sequences: 59808
Number of extensions: 660369
Number of successful extensions: 2141
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2120
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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