Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0379
(840 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 195 2e-51
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 195 2e-51
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 195 2e-51
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 186 6e-49
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.2
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 3.8
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 5.0
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 6.6
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 8.7
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 195 bits (475), Expect = 2e-51
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 124 bits (299), Expect = 3e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 195 bits (475), Expect = 2e-51
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 124 bits (299), Expect = 3e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 195 bits (475), Expect = 2e-51
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 124 bits (299), Expect = 3e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 186 bits (454), Expect = 6e-49
Identities = 96/139 (69%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 GTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 409
G + +EAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 410 APLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPST 586
APLNPK+NREKMTQIMF F PA+YVAIQAVL V + VS T P
Sbjct: 109 APLNPKSNREKMTQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGDGVSHT-VPIY 167
Query: 587 RDTHFPHAILRLDLAGRDL 643
PHAILR+DLAGRDL
Sbjct: 168 EGYALPHAILRMDLAGRDL 186
Score = 115 bits (277), Expect = 2e-27
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVG +
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 194 GKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLK 292
G+ P GRDG +G GL + + G+ LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.6 bits (51), Expect = 3.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 312 IPCSMGYLRVRIPLLLCASFLHKSP 238
I C + Y R+ ++CA++ H+ P
Sbjct: 60 ITCQIAYRRIEGDRIVCAAYSHELP 84
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 24.2 bits (50), Expect = 5.0
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = +2
Query: 515 TRPVVPPVSCWTXATVSPT-----PCPSTRDT 595
T+ V P S T TV PT PCP T T
Sbjct: 117 TKATVAPKSTTTTTTVKPTTTTPPPCPPTLTT 148
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.8 bits (49), Expect = 6.6
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 RPRGTPSPAH*GSPQPQGQQREDDPDHVRXIQH-ARHVRRHPSRAPLYAS 522
R + T P PQ Q QQR+ V QH + +R P R + S
Sbjct: 271 RGKATGKPRSQQQPQQQQQQRQLQRQAVGIAQHQQQQQQRQPQRQAVAGS 320
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 8.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMC 140
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 906,187
Number of Sequences: 2352
Number of extensions: 20060
Number of successful extensions: 63
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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