Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0379
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 194 7e-50
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 194 7e-50
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 194 7e-50
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 194 7e-50
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 194 7e-50
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 194 7e-50
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 194 7e-50
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 194 7e-50
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 194 9e-50
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 194 9e-50
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 189 2e-48
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 125 3e-29
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 123 2e-28
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 123 2e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 122 4e-28
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 122 4e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 96 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 72 4e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.027
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.027
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 3.1
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 29 3.1
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 29 3.1
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 29 3.1
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 72
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 131
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 132 ILRLDLAGRDL 142
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 219 MVGMGQKDSYVGMRHRAK 272
MVGMGQKDSYVG ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 102
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 161
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 162 ILRLDLAGRDL 172
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 194 bits (473), Expect = 7e-50
Identities = 100/131 (76%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL V + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 194 bits (472), Expect = 9e-50
Identities = 99/131 (75%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 122 bits (293), Expect = 4e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 194 bits (472), Expect = 9e-50
Identities = 99/131 (75%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + V+ T P PHA
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT-VPIYEGYALPHA 175
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 176 ILRLDLAGRDL 186
Score = 120 bits (289), Expect = 1e-27
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 96/131 (73%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+N
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSN 115
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYV IQAVL + T V+ T P PHA
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEGYALPHA 174
Query: 611 ILRLDLAGRDL 643
I RLDLAGRDL
Sbjct: 175 IQRLDLAGRDL 185
Score = 116 bits (280), Expect = 2e-26
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 125 bits (302), Expect = 3e-29
Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +2
Query: 257 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 433
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAI 613
RE+ +I F FN PA+Y+ +QAVL P + HAI
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAI 179
Query: 614 LRLDLAGRDL 643
R+DLAGRD+
Sbjct: 180 QRMDLAGRDV 189
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 122 bits (293), Expect = 4e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKI 343
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 122 bits (293), Expect = 4e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDM 334
+EAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 105 bits (253), Expect = 3e-23
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 391
R G + L+ E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 392 PVLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSP 568
+LLTE PLNP +NREKM Q+MF + ++YVA+QAVL + ++ V + V+
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Query: 569 TPCPSTRDTHFPHAILRLDLAGRDL 643
CP H RLD+AGRD+
Sbjct: 166 I-CPVYEGFALHHLTRRLDIAGRDI 189
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = +2
Query: 284 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFX 463
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMF
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 464 XFNTPAMYVAIQAVLRCT 517
FN P +Y+A+QAVL T
Sbjct: 140 SFNVPGLYIAVQAVLALT 157
Score = 37.1 bits (82), Expect = 0.016
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 532 TGIVLDXGDGVSHTVPIYEGYAL 600
TG+V+D GDGV+H +P+ +GY +
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVI 193
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +2
Query: 299 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXFNTP 478
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMF F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 479 AMYVAIQAVLRC 514
A Y++ VL C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 514 YASGRTTGIVLDXGDGVSHTVPIYEGYAL 600
+A GRT G+++D G + VP+++GYA+
Sbjct: 166 FAQGRTHGLMVDSGATQTSVVPVFDGYAV 194
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXF 469
PIE G V NWD ++IW TF + V + LT+ A + ++I+F F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXF 469
PIE G V NWD ++IW TF + V + LT+ A + ++I+F F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 484 VRRHPSRAPLYASGRTTGIVLDXGDGVSHTVPIYEGYAL 600
+ R PS LYA TTG+V+D G+ V + VP+ +GY +
Sbjct: 307 ITRQPSLI-LYAYDVTTGVVVDIGERV-NIVPVIDGYVV 343
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 191 RGKAPPSGRDGRYGTEGLLCRNEAQSKRG 277
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 TVSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSIT 700
TVS TP P TH HA + + D H H+ ++RS++
Sbjct: 902 TVSLTPAPPAAMTHSMHA---MHIGASDAHYHQHQHQQQQNPIVRSVS 946
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 TVSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSIT 700
TVS TP P TH HA + + D H H+ ++RS++
Sbjct: 900 TVSLTPAPPAAMTHSMHA---MHIGASDAHYHQHQHQQQQNPIVRSVS 944
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 TVSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSIT 700
TVS TP P TH HA + + D H H+ ++RS++
Sbjct: 900 TVSLTPAPPAAMTHSMHA---MHIGASDAHYHQHQHQQQQNPIVRSVS 944
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 TVSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSIT 700
TVS TP P TH HA + + D H H+ ++RS++
Sbjct: 900 TVSLTPAPPAAMTHSMHA---MHIGASDAHYHQHQHQQQQNPIVRSVS 944
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 557 TVSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSIT 700
TVS TP P TH HA + + D H H+ ++RS++
Sbjct: 900 TVSLTPAPPAAMTHSMHA---MHIGASDAHYHQHQHQQQQNPIVRSVS 944
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -1
Query: 348 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASFLHKSPSVPYRPSRPDG 205
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 433 QREDDPDHVRXIQHARHVRRHPSRAPLYASG 525
Q D++R + H+R +P R PLY SG
Sbjct: 242 QHNISADYIRDLLHSRIYPDNPRRDPLYRSG 272
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 141 KAGFAGDDAPRAVFPSIVGRPRHQG 215
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,465,539
Number of Sequences: 27780
Number of extensions: 449359
Number of successful extensions: 1706
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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