Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0379
(840 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 193 1e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 193 1e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 193 1e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 191 4e-49
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 191 4e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 191 4e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 191 4e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 190 8e-49
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 190 8e-49
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 175 4e-44
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 162 3e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 161 4e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 2e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 88 8e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 77 1e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 3e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 56 4e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 4e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 3e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.14
At4g22900.1 68417.m03308 expressed protein 30 1.7
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 29 5.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 5.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 5.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 6.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 193 bits (471), Expect = 1e-49
Identities = 99/131 (75%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 193 bits (470), Expect = 1e-49
Identities = 99/131 (75%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 193 bits (470), Expect = 1e-49
Identities = 99/131 (75%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FNTPAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 191 bits (466), Expect = 4e-49
Identities = 98/131 (74%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 191 bits (466), Expect = 4e-49
Identities = 96/131 (73%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN+PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 191 bits (466), Expect = 4e-49
Identities = 96/131 (73%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN+PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 191 bits (466), Expect = 4e-49
Identities = 96/131 (73%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN+PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 190 bits (464), Expect = 8e-49
Identities = 97/131 (74%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (464), Expect = 8e-49
Identities = 97/131 (74%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF FN PAMYVAIQAVL + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 177 ILRLDLAGRDL 187
Score = 99 bits (238), Expect = 2e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 175 bits (425), Expect = 4e-44
Identities = 86/131 (65%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 434 REKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHA 610
REKMTQIMF F P+MY+ IQAVL + + + VS T P PHA
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 177
Query: 611 ILRLDLAGRDL 643
ILRLDLAGRDL
Sbjct: 178 ILRLDLAGRDL 188
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 162 bits (393), Expect = 3e-40
Identities = 78/134 (58%), Positives = 94/134 (70%)
Frame = +2
Query: 242 LLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 421
L ++A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 422 PKANREKMTQIMFXXFNTPAMYVAIQAVLRCTRPVVPPVSCWTXATVSPTPCPSTRDTHF 601
PKA+REKMTQIMF F P+MY+ +QA L + P +
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSAL 128
Query: 602 PHAILRLDLAGRDL 643
PHAILRLDLAGR L
Sbjct: 129 PHAILRLDLAGRHL 142
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 161 bits (392), Expect = 4e-40
Identities = 87/144 (60%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 394
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 395 VLLTEAPLNPKANREKMTQIMFXXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPT 571
VLLTEAP NPKANREKMTQIMF F+ PAMYV++Q+VL + V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 572 PCPSTRDTHFPHAILRLDLAGRDL 643
P PH ILRLDL GRDL
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDL 176
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (246), Expect = 2e-22
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 460
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 461 XXFNTPAMYVAIQAVLRC-TRPVVPPVSCWTXATVSPTPCPSTRDTHFPHAILRLDLAGR 637
+N +++ IQAVL + ++ + + V+ P FPH R+++AGR
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHV-VPVVDGYSFPHLTKRMNVAGR 184
Query: 638 DL 643
+
Sbjct: 185 HI 186
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 254
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 87.8 bits (208), Expect = 8e-18
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXX 466
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+F
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 467 FNTPAMYVAIQAVL 508
FN P +Y+A+ +VL
Sbjct: 146 FNVPGLYIAVNSVL 159
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 532 TGIVLDXGDGVSHTVPIYEGYAL 600
TG+V+D GDG +H VP+ EGY +
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVI 195
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 448
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 449 QIMFXXFNTPAMYVAIQAVL 508
++MF + PA+++A VL
Sbjct: 145 ELMFEKYKVPALFMAKNPVL 164
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 514 YASGRTTGIVLDXGDGVSHTVPIYEGYAL 600
+A+GR T +V+D G G + P+++GY L
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVL 195
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFXXFN 472
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF FN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 473 TPAMYVAIQAVL 508
Y + QAVL
Sbjct: 117 VSGFYASEQAVL 128
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXX 466
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++F
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 467 FNTPAMYVA 493
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXXFN 472
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++F +
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 473 TPAMYVAIQA 502
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 232 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 95
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g22900.1 68417.m03308 expressed protein
Length = 343
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 560 VSPTPCPSTRDTHFPHAILRLDLAGRDLHRLPHEXSSTSGGLIRSITTAEPGN 718
VSP C TR H+ A++ A +D HE +SGG++ S T GN
Sbjct: 204 VSPYVCKGTRQGHY--ALVMKTEAQKD----DHEGGGSSGGVVASSTEVNGGN 250
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 599 SAYPS*MGTVWETPSPXSSTIPVVRPDAYSGARLGW 492
+AYPS TV+ SP P + P +Y G+ +G+
Sbjct: 461 AAYPSPPTTVYSNRSPPYPYSPEIIPGSYQGSPIGY 496
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 409 GSPQPQGQQREDDPDHVR---XIQHARHVRRHPSRAPLY 516
GSP+ +G + E+D D + I+H + +H + A LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,605,111
Number of Sequences: 28952
Number of extensions: 428297
Number of successful extensions: 1146
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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