Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0376
(831 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 151 2e-35
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 143 6e-33
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 122 8e-27
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 114 2e-24
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 111 3e-23
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 106 6e-22
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 100 9e-20
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 98 2e-19
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 96 8e-19
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 95 2e-18
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 95 2e-18
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 93 6e-18
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 91 2e-17
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 91 2e-17
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 90 5e-17
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 89 2e-16
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 88 3e-16
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 85 3e-15
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 80 8e-14
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 79 1e-13
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 67 4e-10
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 65 2e-09
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 63 9e-09
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 60 9e-08
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 59 1e-07
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 58 4e-07
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 57 5e-07
UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1... 56 1e-06
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 53 1e-05
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 53 1e-05
UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PC... 50 9e-05
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 48 4e-04
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 47 7e-04
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 46 9e-04
UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3; Meth... 46 0.001
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 46 0.002
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 45 0.003
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 44 0.006
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 43 0.011
UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1; Meta... 41 0.044
UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1; Cald... 41 0.044
UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp sub... 40 0.058
UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6; Su... 40 0.076
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 39 0.18
UniRef50_Q2JIG7 Cluster: Anti-sigma factor antagonist; n=2; Syne... 37 0.54
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 36 1.2
UniRef50_A5AUA3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 35 2.9
UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A5JZJ4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n... 34 5.0
UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5; Methanos... 34 5.0
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 34 5.0
UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5; Ther... 34 5.0
UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_Q4UH03 Cluster: Putative uncharacterized protein; n=3; ... 33 6.6
UniRef50_A0D3H6 Cluster: Chromosome undetermined scaffold_36, wh... 33 6.6
UniRef50_Q4RKY8 Cluster: Chromosome 1 SCAF15025, whole genome sh... 33 8.8
UniRef50_A7MEN5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 151 bits (366), Expect = 2e-35
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
++ +MD+SHVSLV LTLR++GFD YRCDRN++MG+NL SMSKILKCAG++D +T++A+DN
Sbjct: 36 NLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDN 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQV-LNLLESAGISHSL 602
AD + VFE+PNQEKVSDYEMKLM+LD V Q ++C V + E A I L
Sbjct: 96 ADTLALVFEAPNQEKVSDYEMKLMDLD----VEQLGIPEQEYSCVVKMPSGEFARICRDL 151
Query: 603 E---NQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEMGRARQLLTFA 770
+ K KFSA+G++G+ N+KL + ++AV IEM Q LTFA
Sbjct: 152 SHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNV-DKEEEAVTIEMNEPVQ-LTFA 208
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 5/61 (8%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKV-----LGNRRHRLS 673
E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVK LGN +LS
Sbjct: 124 EQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLS 183
Query: 674 E 676
+
Sbjct: 184 Q 184
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQ 38
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 143 bits (346), Expect = 6e-33
Identities = 76/165 (46%), Positives = 105/165 (63%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMD+SHV+LVSL LR++GF+ YRCDRN+SMGMNLG+MSK+LKCAG+ D +TIKA D
Sbjct: 36 SLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDG 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLE 605
+D VTF+FESP Q+K++D+EMKLM++D ++ S+
Sbjct: 96 SDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIG 155
Query: 606 NQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEM 740
+ K+ KFS GDIG+AN+ L + + A+VIEM
Sbjct: 156 DTVVISVTKEGVKFSTAGDIGTANIVLRQNTTV-DKPEDAIVIEM 199
Score = 72.9 bits (171), Expect = 9e-12
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +2
Query: 497 EFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 643
+ SEHLGIP+ EY +RMPS EF+RIC+DLS G+++VIS TKEGVK
Sbjct: 120 DIDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVK 168
Score = 49.6 bits (113), Expect = 9e-05
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M E RL++ S+LKKVLEA+KDL+ A FDC G LQ
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQ 38
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 122 bits (295), Expect = 8e-27
Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMDNSH++LV+L L A FD+YRCDRN+ +G+NL S++KILKCA D D VT+KA D+
Sbjct: 36 SLQAMDNSHIALVALKLEASEFDEYRCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDD 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD---LNI*VFQRLNTAALFACQVLNLLESAGISH 596
AD + +FESP +++V +YEMKLM++D L I Q T ++ + + + +
Sbjct: 96 ADALNLIFESPKEDRVGEYEMKLMDIDQEHLGIPDTQYDATVSMSSAEFARICRDLAV-- 153
Query: 597 SLENQW*FHAPKKE*KFSATGDIGSANVKL 686
L K+ FSA G++G +V L
Sbjct: 154 -LGESVKIECSKEGVTFSADGEVGKGSVLL 182
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EAR+ ++ +LKK+L+AIK+L++ DC + GI LQ
Sbjct: 1 MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQ 38
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 114 bits (275), Expect = 2e-24
Identities = 56/144 (38%), Positives = 84/144 (58%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
+MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D +
Sbjct: 39 SMDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEK 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLENQW 614
+T FES +E+ +DYE+KL+NLD + + + +
Sbjct: 99 ITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESL 158
Query: 615 *FHAPKKE*KFSATGDIGSANVKL 686
K +F A GD+G+AN++L
Sbjct: 159 TIACSSKGIRFLAKGDLGTANIQL 182
Score = 66.9 bits (156), Expect = 6e-10
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVL 649
+H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++ L
Sbjct: 124 DHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFL 170
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQ 38
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 111 bits (266), Expect = 3e-23
Identities = 58/147 (39%), Positives = 88/147 (59%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
++ AMDNSHV+LVS+ L+A+GF YRCDRN+++G+NL S++K+L+ A ++D +TIKA+D
Sbjct: 36 ALQAMDNSHVALVSMMLKAEGFSPYRCDRNVALGVNLTSLTKVLRAAQNEDILTIKAEDA 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLE 605
D + VFES +++S+Y++KLM++D AA+ +L
Sbjct: 96 PDVLNLVFESSESDRLSEYDLKLMDIDQEHLGIPDTEYAAVINMPSSEFKRICVDLMALS 155
Query: 606 NQW*FHAPKKE*KFSATGDIGSANVKL 686
A K KFS GDIG+ V L
Sbjct: 156 ESVSIEASKDGVKFSCAGDIGNGAVTL 182
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EARL ++ +LKKV++AIKDL+ FDC D+GI LQ
Sbjct: 1 MLEARLEQADLLKKVVDAIKDLVQDCNFDCNDSGIALQ 38
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 106 bits (255), Expect = 6e-22
Identities = 43/87 (49%), Positives = 67/87 (77%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
++ AMDNSHV+LV++ + GF +YRCDR + +G+NLGS++K+LKCA D D T+KA D
Sbjct: 36 NLQAMDNSHVALVAVKILVSGFKRYRCDRPMPLGVNLGSLTKVLKCAKDDDICTLKAADE 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
AD + ++E+ N +++++YEMKLM +D
Sbjct: 96 ADVLNLIYEAKNSDRIAEYEMKLMEID 122
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +2
Query: 497 EFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 643
E ++ L IP+TEY + MPSSEFARI RDLSQ GES+ I +KEGV+
Sbjct: 120 EIDADALTIPDTEYEARVTMPSSEFARIVRDLSQLGESVRIEVSKEGVR 168
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EA+L + +LKK+L+AIK+L+T A F+C + GI LQ
Sbjct: 1 MLEAKLAEAGLLKKLLDAIKELVTDANFECNEEGINLQ 38
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 99.5 bits (237), Expect = 9e-20
Identities = 52/147 (35%), Positives = 83/147 (56%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ MD SHV+LVSL L A+GF KYRCDRN+ + +++ S+SKI+KC ++ +V +KA+D
Sbjct: 36 SMQVMDTSHVALVSLQLHAEGFKKYRCDRNVPLNVSINSLSKIVKCVNERSSVLMKAEDQ 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLE 605
D + FVF N ++ Y +KLM +D+ + + + + +
Sbjct: 96 GDVMAFVFN--NDNRICTYTLKLMCIDVEHLGIPDSDYDCVVHMSSVEFAQVCKDMTQFD 153
Query: 606 NQW*FHAPKKE*KFSATGDIGSANVKL 686
+ KK +F A GDIGSA+V++
Sbjct: 154 HDIIVSCSKKGLQFRANGDIGSADVQM 180
Score = 64.9 bits (151), Expect = 2e-09
Identities = 22/49 (44%), Positives = 38/49 (77%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVLGN 655
EHLGIP+++Y C + M S EFA++C+D++QF +++SC+K+G++ N
Sbjct: 122 EHLGIPDSDYDCVVHMSSVEFAQVCKDMTQFDHDIIVSCSKKGLQFRAN 170
Score = 46.4 bits (105), Expect = 9e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQLWTT 267
MFEA ++LK+++E KDLL ATFDC + G+ +Q+ T
Sbjct: 1 MFEAEFKTGAVLKRLVETFKDLLPHATFDCDNRGVSMQVMDT 42
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 98.3 bits (234), Expect = 2e-19
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
V AM NS++S+++L L + GF+ YRCD N SMGMNL SM ++L A D +TIKA D
Sbjct: 37 VQAM-NSNLSILALVLHSSGFEHYRCDHNFSMGMNLYSMVELLNRANGDDIITIKADDGG 95
Query: 429 DNVTFVFESPNQEKVSDYEMKLMNLD 506
D VTF FESP Q ++S++EM+L+++D
Sbjct: 96 DTVTFTFESPRQNQISNFEMRLVDID 121
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQLWT---TLMCLSCHS 291
M E R ++ S+LKKV E IK+ + F C GI +Q +++ L HS
Sbjct: 1 MLEVRFVQGSLLKKVSEIIKEFIHDTNFYCSSTGIIVQAMNSNLSILALVLHS 53
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 96.3 bits (229), Expect = 8e-19
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMDNSHV+L ++ LR D F+++RCDR +S+G++L S+ KILK A + D + +K D+ D
Sbjct: 39 AMDNSHVALSAIELRTDCFEEFRCDRPMSIGVSLSSLGKILKSANNDDVLALKKSDDGDT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLD---LNI*VFQRLNTAALFACQVLNLL-ESAGISHSL 602
+ FESP ++V ++EMKLM++D L I Q + + + + + A I S+
Sbjct: 99 LQMTFESPKSDRVGEFEMKLMDIDSEHLGIPDTQYDAVVKMSSGEFGRICRDLANIGESV 158
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKL 686
+ K+ FSA G+IG+A + L
Sbjct: 159 K----IEVSKEGVSFSAEGEIGAARMTL 182
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +2
Query: 446 F*EPKSRESL*LRDEAYEFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISC 625
F PKS + + SEHLGIP+T+Y ++M S EF RICRDL+ GES+ I
Sbjct: 103 FESPKSDRVGEFEMKLMDIDSEHLGIPDTQYDAVVKMSSGEFGRICRDLANIGESVKIEV 162
Query: 626 TKEGV 640
+KEGV
Sbjct: 163 SKEGV 167
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EARL + +LKKVL+A+++L+T A F+C ++GI+LQ
Sbjct: 1 MLEARLPEAVLLKKVLDAVRELITDANFECSEDGIRLQ 38
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 95.1 bits (226), Expect = 2e-18
Identities = 47/146 (32%), Positives = 83/146 (56%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
A+D+S V LVSL + + F +YRCD +++GM+L S+SKIL+C + DT+T+ A + D+
Sbjct: 39 AVDDSRVLLVSLEIGVEAFQEYRCDHPVTLGMDLTSLSKILRCGNNTDTLTLIADNTPDS 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLENQW 614
+ +FE ++++++Y +KLM++D + + L + + + L +
Sbjct: 99 IILLFEDTKKDRIAEYSLKLMDIDADFLKIEELQYDSTLSLPSSEFSKIVRDLSQLSDSI 158
Query: 615 *FHAPKKE*KFSATGDIGSANVKLGP 692
K+ KF A GDIGS +V + P
Sbjct: 159 NIMITKETIKFVADGDIGSGSVIIKP 184
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 95.1 bits (226), Expect = 2e-18
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMD+SHV+LVSL L FD YRCDR I++G++L +MSK LKCA + DT +K ++N
Sbjct: 2 SLQAMDSSHVALVSLKLEVGLFDTYRCDRTINLGLSLANMSKALKCANNDDTCMLKYEEN 61
Query: 426 -ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSL 602
D++ F F P ++K D +K+M++D + A + ++ +
Sbjct: 62 EGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYAVVCEMPAGEFQKTCKDLSTF 121
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKLGP 692
+ A K F+ GDIGS+ V P
Sbjct: 122 SDSLNITATKAGIVFTGKGDIGSSVVTYSP 151
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/149 (29%), Positives = 84/149 (56%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
++ AMDNSHVSLV L L+ F++YRCD+N ++G+N ++ K+LK + D V ++ D+
Sbjct: 36 TIQAMDNSHVSLVGLYLKDTAFERYRCDKNRTLGLNTQNVVKLLKLCSNDDQVLLRHDDD 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLE 605
++++ F+FE+PN ++VS++E+ L+++D + + +++
Sbjct: 96 SESLIFIFETPNGDRVSEFELTLISIDQDSLQIPETSFSSVVTMPSNEFQRLCRDMAQFS 155
Query: 606 NQW*FHAPKKE*KFSATGDIGSANVKLGP 692
+ K +FS G +GS ++ L P
Sbjct: 156 DSLSIDVTSKNVRFSTKGSLGSGSIILRP 184
Score = 41.1 bits (92), Expect = 0.033
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL IL+KV EAI +L++ +C ++G+ +Q
Sbjct: 1 MFEARLSNGGILRKVFEAITNLVSDVNLECNESGVTIQ 38
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 91.5 bits (217), Expect = 2e-17
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
V +MD+SHV+LVSL LR F ++RCDR S+GMN+ S++KILK G D++ ++ + +A
Sbjct: 38 VQSMDSSHVALVSLLLRESAFAEFRCDRPTSLGMNVDSLAKILKMCGTSDSLKLRWRGDA 97
Query: 429 DNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLE- 605
D V+F ES +++++D+E+KLM ++ + L E I L+
Sbjct: 98 DMVSFQCESGEEDRIADFELKLMQIESE---HMEIPEQHYKVSAKLPSSEFQKICRDLKE 154
Query: 606 --NQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGK 719
A K+ FS GD+G+ NV L P P K
Sbjct: 155 FGETMQVKASKEGITFSVQGDMGAGNVMLKPREAEKPEDK 194
Score = 61.7 bits (143), Expect = 2e-08
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +2
Query: 506 SEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 640
SEH+ IPE Y + ++PSSEF +ICRDL +FGE+M + +KEG+
Sbjct: 124 SEHMEIPEQHYKVSAKLPSSEFQKICRDLKEFGETMQVKASKEGI 168
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 148 EARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
EA L ++ +LKKV++AIKDL FDC + G+Q+Q
Sbjct: 4 EAHLQQAVLLKKVVDAIKDLCKDVNFDCSEKGLQVQ 39
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 91.5 bits (217), Expect = 2e-17
Identities = 38/86 (44%), Positives = 63/86 (73%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
A+D +HVSLVSL L GF YRCDR +G+N+ S++K+ K G ++V I ++D+ DN
Sbjct: 39 ALDGNHVSLVSLHLLDSGFSHYRCDRERVLGVNIASLNKVFKLCGANESVVISSKDDEDN 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLN 512
+ FVFE+ ++KV+++ +KLM+++L+
Sbjct: 99 LNFVFENNKEDKVTNFSLKLMSIELD 124
Score = 41.5 bits (93), Expect = 0.025
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EA+L +SILKK+ E IKDL+ A D ++G++LQ
Sbjct: 1 MLEAKLNNASILKKLFECIKDLVNDANVDADESGLKLQ 38
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 90.2 bits (214), Expect = 5e-17
Identities = 47/144 (32%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMD+SHV+LV + LR D F KY+C+RNI +G+NL S+SK+LK D+++++ D+
Sbjct: 36 SIQAMDSSHVALVHMLLRDDCFVKYQCERNIILGLNLASLSKVLKIVDGNDSLSLRHDDD 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD---LNI*VFQRLNTAALFACQVLNLLESAGISH 596
+D VT E+P + + +Y++KL+ ++ + I +T L + + ++ +
Sbjct: 96 SDVVTLTSENPEKTRKCEYQLKLLEIEAESMGIPEMDYRSTVTLNSAEFAKIVRDMQVFG 155
Query: 597 SLENQW*FHAPKKE*KFSATGDIG 668
K+ KFS++GD+G
Sbjct: 156 DTVT---IAISKEGVKFSSSGDVG 176
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/88 (43%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQ-D 422
S+ AMD SHV+LV+L L GF KYRC+++++MG+++ ++ KILKC+G+ D +T++ Q +
Sbjct: 36 SLQAMDTSHVALVALQLNEKGFKKYRCEKSLTMGLSIENLQKILKCSGNDDQITLRTQEE 95
Query: 423 NADNVTFVFESPNQEKVSDYEMKLMNLD 506
++F FES N ++S++++ LM+LD
Sbjct: 96 EPTTLSFTFESKN--RISEFQLNLMSLD 121
Score = 57.6 bits (133), Expect = 4e-07
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 643
E LG+P+T+YS I+MPS+EF +ICR+L E++ I +K+G+K
Sbjct: 123 EQLGVPDTDYSSVIKMPSNEFTKICRELGNINEAIGIETSKDGIK 167
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQLWTT 267
MFEA+ + KK++EAIK+L+ + GI LQ T
Sbjct: 1 MFEAKFEDGVLFKKIVEAIKELVKNVNLEANGTGISLQAMDT 42
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 87.8 bits (208), Expect = 3e-16
Identities = 35/86 (40%), Positives = 62/86 (72%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMD +HV+LVS+ L A+GF+KY C +N S+G+NLG++ KILKC + D +T++ ++
Sbjct: 36 SLQAMDTAHVALVSMNLNANGFEKYNCAQNTSLGVNLGAIQKILKCGDNNDVLTLETNED 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNL 503
+ F FE+ + ++ +++M LM++
Sbjct: 96 QSCLKFKFENSSSDRYFEFQMNLMDI 121
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 497 EFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 640
+ SEHL IP+ E TI + SEF +ICRDL+QFG+++ I+ K V
Sbjct: 120 DISSEHLSIPDAEPEATITLGCSEFQKICRDLAQFGDTVKITVEKSRV 167
Score = 40.3 bits (90), Expect = 0.058
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQLWTT 267
M E RL LKK+L+A++DL+ +A +C + G+ LQ T
Sbjct: 1 MVECRLTNPGNLKKILDALRDLVEEANIECSETGLSLQAMDT 42
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 84.6 bits (200), Expect = 3e-15
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMD+SHV+LV+L L GF +RCDR +G+NL S+ K+ K + D+ +I+ ++++D
Sbjct: 39 AMDSSHVALVALKLDDAGFVHFRCDRERLLGLNLASVCKVFKLCSNADSCSIQNEEDSDT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLD---LNI*VFQRLN--TAALFACQVLNLLESAG-ISH 596
VTFVFE+ EK+S + ++LM +D L + + + T + A + N++ G S
Sbjct: 99 VTFVFENEADEKLSSFSLRLMAIDQDALRVPEDETAHDVTVTMSAREFANVVRIMGEFSD 158
Query: 597 SLENQW*FHAPKKE*KFSATGDIGSANVKLGPXRF 701
S+ K KF GD+G V L P F
Sbjct: 159 SVR----VEVDKLGVKFVTQGDLGVGEVLLKPKPF 189
Score = 41.1 bits (92), Expect = 0.033
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EA+L +S+L+++ E+IKD+++ DC + G++LQ
Sbjct: 1 MLEAKLQHASVLRRLFESIKDMVSDVNLDCDETGLRLQ 38
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 79.8 bits (188), Expect = 8e-14
Identities = 33/87 (37%), Positives = 59/87 (67%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ A+D +HV+LV L L GF YRCDR ++G+NL S++K K + D+V I++++
Sbjct: 36 SLQALDGNHVALVHLKLHESGFSLYRCDRPRALGINLNSVTKAFKSCSNHDSVLIQSEEE 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
D ++F+FE+ ++V + +KLM+++
Sbjct: 96 KDYISFIFENNVDDRVMSFSLKLMSIE 122
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/87 (40%), Positives = 63/87 (72%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ AMD+SHVSLVSL + + F+ Y+C++ S+G+NL KILKCA ++D+V I ++N
Sbjct: 36 SLQAMDSSHVSLVSLIIPPEEFEVYQCEKIQSLGINLNWFYKILKCATNEDSVEIIYKNN 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
+ +TF+F + E+ S+++++L+ ++
Sbjct: 96 ENFITFLFRNEANERSSEFQLRLLEIN 122
Score = 42.7 bits (96), Expect = 0.011
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 497 EFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 643
E +E LGIPET YS + + + E+ R+C ++ G+++ +S ++ +K
Sbjct: 120 EINNETLGIPETIYSAVVTLTAVEYKRVCSEMLTIGDTVYLSISENTIK 168
Score = 38.3 bits (85), Expect = 0.23
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M A+L +S+LKK+++A+KDL++ A + ++G+ LQ
Sbjct: 1 MLRAKLSSNSLLKKIVDAVKDLISDANIEFTNSGLSLQ 38
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 67.3 bits (157), Expect = 4e-10
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDT-VTIKA-QDNA 428
AMD+SHV+LVSL ++ D F+ YRCDR + +G+++ +SK +K DKDT +T+K DN
Sbjct: 39 AMDSSHVALVSLNIQPDAFEHYRCDRPVVLGLDMQQLSKFMKFC-DKDTSMTLKKYDDNE 97
Query: 429 DN-VTFVFESPNQEKVSDYEMKLMNLDL 509
DN +T FE N +S E L +D+
Sbjct: 98 DNRITMCFED-NSGILSSKECILRLMDI 124
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVK 643
EH+ IPE EY C + MPS+ F I RD+S G+ + + + + +K
Sbjct: 127 EHISIPEEEYECNVTMPSNLFQSIVRDMSGIGDEVSLEISGKYIK 171
Score = 39.9 bits (89), Expect = 0.076
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL + + KK+ EA+K+L DC +G+ LQ
Sbjct: 1 MFEARLQNAMLFKKIAEALKELCHDINIDCDSDGLHLQ 38
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/148 (24%), Positives = 70/148 (47%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
V AMD++HV L ++ L DGF Y C + + + + + KIL C+G DT T++ +
Sbjct: 36 VQAMDSTHVCLAAINLLRDGFLHYDCSQPLVIDIPIDKFKKILACSGPDDTFTLRF-NGG 94
Query: 429 DNVTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLEN 608
+ +FE+P ++++D+E+ L++++ + L ++L + +
Sbjct: 95 SVLLIMFETPAHDRITDFELNLLDIEQDAMSVPELEPHLHIQMNSIDLKRIVKDYQTFGD 154
Query: 609 QW*FHAPKKE*KFSATGDIGSANVKLGP 692
K +S GD G N+ + P
Sbjct: 155 VITISGTKDGVTYSVNGDFGKGNILIKP 182
Score = 36.7 bits (81), Expect = 0.71
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ-LWTTLMCLSCHSL 294
MFE + + +L++V+E I +L+ + FDC +NG+ +Q + +T +CL+ +L
Sbjct: 1 MFECKG-NAGLLRRVIECIAELIIECRFDCSENGMVVQAMDSTHVCLAAINL 51
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 62.9 bits (146), Expect = 9e-09
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
+V MDNSHVSLVSL + D FD+++C + I++G+NL +SKILK A D D I
Sbjct: 38 AVQCMDNSHVSLVSLLIETDAFDEFQCLKPITLGINLTHLSKILK-ALDNDCGLILDVKK 96
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
D+ S K + + L++++
Sbjct: 97 VDDAVLSITSEGTNKTMKFGLNLVDIE 123
Score = 36.3 bits (80), Expect = 0.94
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 506 SEHLGIPETEYSCTIRMPSSEFARICRDLSQFG-ESMVISCTKEGV 640
+E + IPE + I + S+EF +I +D S G +S+ I CTK V
Sbjct: 124 AESVEIPELQSDAIITLSSAEFLKITKDFSALGDDSITIGCTKNEV 169
Score = 35.5 bits (78), Expect = 1.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 145 FEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
F A+ +++ K+V+E++K + + FDC D GI +Q
Sbjct: 4 FHAKFKEAALFKRVVESLKSTIDKTNFDCSDAGIAVQ 40
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 59.7 bits (138), Expect = 9e-08
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTI-KAQD 422
S+ AMDNSH+SL+ L L D F YRCD ++G+N+ M KIL +K + + + D
Sbjct: 35 SMQAMDNSHISLIHLCLAPDFFQLYRCDTPCTLGLNISFMLKILAVVREKSVIYLARGDD 94
Query: 423 NADNVTFV 446
+ D V FV
Sbjct: 95 SEDPVLFV 102
Score = 41.1 bits (92), Expect = 0.033
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKV 646
EHL IP+ EY+C M S F + L G+++VIS K+ +K+
Sbjct: 130 EHLDIPDCEYTCKCVMNSRRFQEFAKYLHSIGDTVVISMNKDVIKL 175
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/84 (29%), Positives = 52/84 (61%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMD SHVSL+S++L AD F+ Y C +++ N+ ++K+LK A D + I + ++
Sbjct: 39 AMDISHVSLISISLPADIFNTYNCSEEMNLAFNVDVLNKVLKSASTDDYLKISTEKPNED 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLD 506
+T + +++K + + +K ++++
Sbjct: 99 ITIQLSTQSEDKNTRFNLKPVDIN 122
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
+MD SHVSLV L + +D F YRCD+N +G+++ M KIL +K TV + +DN ++
Sbjct: 38 SMDCSHVSLVDLNIVSDFFQHYRCDKNCVLGISINFMLKILSVIKEKSTVFLFKEDNEND 97
Query: 435 VTF---VFESPNQEKVSD---YEMKLMN 500
+ + Q D ++KL+N
Sbjct: 98 AVLNIGIIDEEEQSSADDSLEIQVKLIN 125
Score = 38.7 bits (86), Expect = 0.18
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 467 ESL*LRDEAYEFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGV 640
+SL ++ + EHL IP++EY C M S +F + L+ G+++ IS K+ +
Sbjct: 115 DSLEIQVKLINAQKEHLEIPQSEYHCQCTMKSKKFQEFTKYLNSIGDNVSISMKKDAM 172
Score = 36.7 bits (81), Expect = 0.71
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFE R+ KK+ E +KD+ T+ +C +NGI++Q
Sbjct: 1 MFECRI-DGQFFKKLFETLKDICTEVNLECDENGIKMQ 37
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 57.2 bits (132), Expect = 5e-07
Identities = 24/87 (27%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
++A+D + VSLV L L ++ F++Y+C+ +G+N+ +M K+L+ AG D++ + N
Sbjct: 43 ISALDGAKVSLVHLKLDSESFEEYKCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKND 102
Query: 429 DN-VTFVFESPNQEKVSDYEMKLMNLD 506
+ + ++ + ++ + MKL+ +D
Sbjct: 103 PHMIELTIQNFEKNSLTKFNMKLIEID 129
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 497 EFGSEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVLGN 655
E S + + + E+ I MP++ F RICRD+S + +VI K+G +V N
Sbjct: 127 EIDSVEIEVGDIEFDTIIVMPANYFQRICRDMSDITDHLVI--VKKGDEVSFN 177
>UniRef50_Q7QSA2 Cluster: Proliferating cell nuclear antigen; n=1;
Giardia lamblia ATCC 50803|Rep: Proliferating cell
nuclear antigen - Giardia lamblia ATCC 50803
Length = 299
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ +DN ++L+SL L F +RC+R S+G+ S K++K + D VT+ + N
Sbjct: 42 SIETIDNGRIALISLHLPTQFFKNFRCERACSLGVRTASFLKVIKFCSNDDLVTLSQRSN 101
Query: 426 -ADNVTFVFESPNQEKVSDYEMKLMNLD 506
+D + + ES + ++ ++L D
Sbjct: 102 SSDQLDILVESRKYSQTMNFSLRLFRSD 129
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/87 (25%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQDN 425
++AMD + VSLV + L A+ F++Y C+ +G+N+ ++ K+L+ G +D++ + + N
Sbjct: 72 ISAMDGAKVSLVHMKLDAEAFEEYVCNNTYEIGVNVTNLFKLLRTTGSRDSIMFRYLKSN 131
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
+ ++ + + + +KL+ +D
Sbjct: 132 PHVLEITIQNFEKNSTTQFFLKLIEID 158
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 52.8 bits (121), Expect = 1e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 258 MDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
MD SHV+L+ ++ F+KY CD NI G+ + +K++K A KD++TI ++
Sbjct: 41 MDPSHVALIDISWPNSAFEKYECDSNIKFGVRIDEFTKLIKRADKKDSITISVSKDS 97
>UniRef50_Q4KT14 Cluster: PCNA; n=2; Nucleopolyhedrovirus|Rep: PCNA
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 263
Score = 49.6 bits (113), Expect = 9e-05
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ D S +S + LT+ + F + +N+S+ + + + KILK D +TI + +N
Sbjct: 36 SMQCSDTSRISFIKLTMMKEAFKSFTFTKNLSLSVKMSGLCKILKTCTDASVLTIWSGEN 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
+ F+ + + YE KL + D
Sbjct: 96 DSHDYLNFKIKTGKSLKSYEYKLYHFD 122
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIK-AQD 422
SV +MD SHVSLV+L + F Y + ++G+ + + +IL C G+ D +TI D
Sbjct: 50 SVQSMDTSHVSLVNLKIGKSYFKDYSIAQEATVGIKISNFVRILDCVGN-DEITISFTYD 108
Query: 423 NADNVTFVFESPNQEKVSDYEMKLMNLD 506
N D + + + SD++MK ++++
Sbjct: 109 NPDELIV------KSEYSDFKMKTIDIE 130
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 46.8 bits (106), Expect = 7e-04
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKA--- 416
S+ +MD SHV++V + L D F KYRCDR + +G+++ ++ L+ +T+ +
Sbjct: 20 SLDSMDGSHVAVVDVRLAVDLFHKYRCDRPVQLGLSVPNLLLALQPVKSAETLVHLSSLH 79
Query: 417 ----QDNADNVTFV-FESPNQEKVSDYEMKLMNLDL-NI*VFQRLNTAALFACQVLNLLE 578
D D + + E P E++L++++ + V + A + L +
Sbjct: 80 GDDEDDEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEVPEHTEHEATAVVRSKELQD 139
Query: 579 SAGISHSLENQW*FHAPKKE*KFSATGDIGSANVKLGP 692
+SL K + SA GD +A+ K+ P
Sbjct: 140 LVRYLNSLSESIVVKMDKTHMQLSARGDSVAASRKMQP 177
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 46.4 bits (105), Expect = 9e-04
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDN 425
S+ MD +HV+ + L + F KYRCDR + +G+ L ++ KI+K + T + + +
Sbjct: 48 SIQVMDVTHVAFADIFLSSTMFTKYRCDRELVIGVQLKTLIKIIKGMSVEGGGTFRMECD 107
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNLD 506
+ + V +++KL D
Sbjct: 108 DATTNLNIRNTREGNVLSFKLKLFTSD 134
>UniRef50_O27367 Cluster: DNA polymerase sliding clamp; n=3;
Methanobacteriaceae|Rep: DNA polymerase sliding clamp -
Methanobacterium thermoautotrophicum
Length = 244
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
A+D SH++ V L L+A+ FD+Y CD + ++ + K+LK A D V + + N
Sbjct: 39 ALDRSHITYVHLELKAELFDEYVCDEPERINVDTEELMKVLKRAKANDRVILSTDEG--N 96
Query: 435 VTFVFESPNQEKVSDYEMKLMNLD 506
+ FE E V ++++L++++
Sbjct: 97 LIIQFEG---EAVRTFKIRLIDIE 117
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 45.6 bits (103), Expect = 0.002
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 210 DTGHFRLL*QWNSVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAG 389
D F++ S+ AMD S V L+ L L + F KY ++G+N+ + KILK
Sbjct: 25 DEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNMDHLKKILKRGK 84
Query: 390 DKDTVTI-KAQDNADNVTFVFESPNQEKVSDYEMKLMNLDL 509
KDT+ + K ++N +T + +V +++ M +DL
Sbjct: 85 AKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDL 125
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMD SHV ++++ D F+ + D + +G+N ++K+L+ A +D + I + N +
Sbjct: 39 AMDPSHVIMLNMRFPRDSFEVFEVDSKVELGVNFEDVAKVLRRASKEDKLEITSDGNTVS 98
Query: 435 VTFV 446
F+
Sbjct: 99 FAFI 102
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 43.6 bits (98), Expect = 0.006
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 506 SEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMV 616
++ LG+P+ EY+C + +PS+E R C DL++ G + V
Sbjct: 120 ADRLGVPDKEYTCVLAVPSAELTRACADLARLGATTV 156
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 42.7 bits (96), Expect = 0.011
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 252 TAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKIL-KCAGDKDTV-TIKAQDN 425
+AMD SHV+LVS+ + D F++Y D +G++L ++ KI+ + GD+ + + + N
Sbjct: 37 SAMDPSHVALVSMEMPKDVFEEYEGDIQ-DIGIDLEALKKIIARGRGDEKLILDLDVEKN 95
Query: 426 ADNVTFVFESPNQEKVSDYEMKLMNL 503
N+TF + ++ Y++ NL
Sbjct: 96 KLNITFKSNVTRKFSIALYDVSSSNL 121
>UniRef50_A4YIY6 Cluster: DNA polymerase sliding clamp; n=1;
Metallosphaera sedula DSM 5348|Rep: DNA polymerase
sliding clamp - Metallosphaera sedula DSM 5348
Length = 245
Score = 40.7 bits (91), Expect = 0.044
Identities = 19/86 (22%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 249 VTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
V A+D +H+SL+ L + F+++ + G N M K++ A K+ + +++++ +
Sbjct: 36 VVAVDRAHISLIKLHFPKEAFEEFDVEDQFRFGFNTQYMLKVMASAKRKEKIEMESREES 95
Query: 429 DNV-TFVFESPNQEKVSDYEMKLMNL 503
+ V + E P + + + E+ + L
Sbjct: 96 EIVIRMLGEPPREFTIRNIEVPIQEL 121
>UniRef50_A3HAI1 Cluster: DNA polymerase sliding clamp; n=1;
Caldivirga maquilingensis IC-167|Rep: DNA polymerase
sliding clamp - Caldivirga maquilingensis IC-167
Length = 297
Score = 40.7 bits (91), Expect = 0.044
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYR-CDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
A+D S ++V L + FD+Y +++I++G+N + KIL+ AG +VT + ++N+
Sbjct: 88 ALDPSRTAMVDLYMPRTAFDEYPDVEQDINIGVNFSEVKKILQRAGKGSSVTFEVEENS 146
>UniRef50_UPI00015BB244 Cluster: DNA polymerase sliding clamp
subunit A; n=1; Ignicoccus hospitalis KIN4/I|Rep: DNA
polymerase sliding clamp subunit A - Ignicoccus
hospitalis KIN4/I
Length = 248
Score = 40.3 bits (90), Expect = 0.058
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
A+D + V ++ + + AD F +Y + S+G N+G + K K A + + ++
Sbjct: 38 AIDPAQVVMIRIYIPADAFSEYEVEEEESLGFNIGDILKFFKRAKKGYKLELGSEAEGSK 97
Query: 435 VTFVFES--------PNQEKVSDYEMKLMNLDLNI 515
+ V E PN E VS+ L NLD +
Sbjct: 98 IRIVLEGALIKKYVIPNLEVVSEELPDLSNLDFKV 132
>UniRef50_Q4JAI6 Cluster: DNA polymerase sliding clamp 1; n=6;
Sulfolobaceae|Rep: DNA polymerase sliding clamp 1 -
Sulfolobus acidocaldarius
Length = 247
Score = 39.9 bits (89), Expect = 0.076
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +3
Query: 210 DTGHFRLL*QWNSVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAG 389
D G F + + A+D +HVSL+++ L + F +Y + G N ++KIL A
Sbjct: 23 DEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFNSQYLAKILSIAK 82
Query: 390 DKDTVTIKAQDNADNV 437
K+ ++I++ D+ + V
Sbjct: 83 RKEEISIES-DSPERV 97
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 38.7 bits (86), Expect = 0.18
Identities = 22/87 (25%), Positives = 47/87 (54%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
A+D +HV+L+ + L + F +Y + + +G N+ +++KI+K D + I+ + D
Sbjct: 41 ALDPAHVALMVMELPPESFIEYEVEDEVKLGFNVANIAKIIKRGKKGDKLDIEVDE--DR 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI 515
VT+ ++ +L+NLD+ +
Sbjct: 99 VTWSIVGATIKR-----YRLLNLDVPV 120
>UniRef50_Q2JIG7 Cluster: Anti-sigma factor antagonist; n=2;
Synechococcus|Rep: Anti-sigma factor antagonist -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 124
Score = 37.1 bits (82), Expect = 0.54
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = +3
Query: 210 DTGHFRLL*QWNSVTAMDNSHVSLVSLTLR---ADGFDKYRC--DRNISMGMNLGSMSKI 374
D G+ +L +SVT MD+S + ++ LR A G + C N+++ +NL SM K+
Sbjct: 44 DFGYTNMLIDMSSVTFMDSSGLGVLISALRKCRAAGGNLSLCCVPENVALVLNLTSMEKV 103
Query: 375 LKCAGDKDT 401
L C D +T
Sbjct: 104 LTCFSDLET 112
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 237 QWNSVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKA 416
Q + AMD HVSL ++ FD Y + +G+ + ++ K+L C D T +
Sbjct: 47 QGMKIVAMDTGHVSLTAVKFAKGMFDVYSLGKETVIGVKVSNLVKVLSCV-DGPTSFVYD 105
Query: 417 QDNAD 431
++ D
Sbjct: 106 EETPD 110
>UniRef50_A5AUA3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1021
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 658 ATSAQRTSSWAQXASIDQEGRRQSSLKWEE 747
A +R S WA S QEGRR+ L WEE
Sbjct: 276 ADPLERNSGWAIGQSESQEGRREKQLNWEE 305
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 34.7 bits (76), Expect = 2.9
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRN-ISMGMNLGSMSKILKCAGDKDTVTIKAQDNAD 431
AMD SH+++ L + + FD+Y + + G+++ +++I++ A D +T++ +D +
Sbjct: 41 AMDASHIAMAVLEMPWEMFDEYEPPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDE-E 99
Query: 432 NVTFVFESPNQEKVSDYEMKLMNLDLN 512
V S E+ E +L ++D++
Sbjct: 100 EVIIKLGSSGYER----EFRLRSIDID 122
>UniRef50_A5K9Z2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 898
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 360 SMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYE 485
S+ LK G DT+ K+ DNA+NV F+ Q ++D E
Sbjct: 855 SIYNTLKTKGKVDTLYFKSYDNAENVAFLMRQSKQRILADVE 896
>UniRef50_A5JZJ4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1426
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 369 KILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLNI 515
+ILK G ++ IK ++N D T++F P +EK KL + N+
Sbjct: 1013 QILKDDGAQELTFIKREENKDEETYIFHYPKKEKYDHLISKLSKNNFNV 1061
>UniRef50_Q016T8 Cluster: Chromosome 06 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 06 contig 1, DNA
sequence - Ostreococcus tauri
Length = 101
Score = 33.9 bits (74), Expect = 5.0
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2
Query: 227 SKVACVSRSLIASKTFFKIELRSKRASNM 141
SK+A V+RSL S+TF +I KRASNM
Sbjct: 63 SKLASVTRSLTESRTFLRIAPSVKRASNM 91
>UniRef50_Q8PVV8 Cluster: Geranylgeranyl reductase; n=5;
Methanosarcina|Rep: Geranylgeranyl reductase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 402
Score = 33.9 bits (74), Expect = 5.0
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +3
Query: 282 VSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPN 461
++L + FD + D+ G+++ S K+L C ++ V ++ N FV +
Sbjct: 99 IALLVSRKAFDNFLLDKARETGIDIHSGEKVLDCEEGEECVEVRTSQNTYLAKFVLIAEG 158
Query: 462 QEKVSDYEMK 491
E V Y ++
Sbjct: 159 SEGVLKYSVR 168
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 33.9 bits (74), Expect = 5.0
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 210 DTGHFRLL*QWNSVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAG 389
D G +++ + A+D S + +V + +G +Y D+ ++G+N+ ++KIL+ A
Sbjct: 23 DEGAYKIQENGIRLRAIDPSRIVMVDFYIPREGLLEYEFDKEETIGVNMEDLTKILRRAV 82
Query: 390 DKDTVTIKAQDNADNVTFVF 449
D + ++ + A + +F
Sbjct: 83 KGDELELRTLE-AGRLAVIF 101
>UniRef50_Q9HJQ0 Cluster: DNA polymerase sliding clamp; n=5;
Thermoplasmatales|Rep: DNA polymerase sliding clamp -
Thermoplasma acidophilum
Length = 246
Score = 33.9 bits (74), Expect = 5.0
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +3
Query: 246 SVTAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTI 410
SVTA+D +HV+++ L + + F ++ D + +++ + +++ A + V I
Sbjct: 35 SVTAVDPAHVAMIRLEVPKEAFVEFHTDGQEEIALDIDRLKSVIRLASSSENVGI 89
>UniRef50_Q9NA32 Cluster: Putative uncharacterized protein; n=3;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 169
Score = 33.5 bits (73), Expect = 6.6
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +3
Query: 276 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFES 455
S++ L +RA GF ++ + N M+ ++ GD + K++D N+T+V
Sbjct: 3 SVLRLAMRAKGFSRFLAETQAFPVKNRHFMTSSVRKTGDFEYEDPKSEDEVVNITYVLRD 62
Query: 456 PNQEKV 473
+ K+
Sbjct: 63 GTERKI 68
>UniRef50_Q4UH03 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 2579
Score = 33.5 bits (73), Expect = 6.6
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 91 LLLIFNKIIEVIH*NINMFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQLWTTL 270
+LL+F++I+ N ++F ++ SILK+VLE I LLT+ + + L L+ +
Sbjct: 430 ILLVFSRILH----NKDIFHPLIVNPSILKRVLECIDSLLTEMEQEIINTDSFLNLFGII 485
Query: 271 MCLS 282
LS
Sbjct: 486 YGLS 489
>UniRef50_A0D3H6 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_36, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2471
Score = 33.5 bits (73), Expect = 6.6
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Frame = +1
Query: 7 RLRTYCFVIYFTQLF*FVCKLGVADCL--ALLLIFN-KII----EVIH*NINMFEARLL- 162
++ YCF Y QL F +L + L A++LI++ K I E + IN + + L
Sbjct: 1104 QMTLYCFPDYNGQLL-FKDRLLILQILVPAIILIYSIKTIFVEQEYLTVKINTIKQKSLD 1162
Query: 163 --RSSILKKVLEAIKD--LLTQATFDCYDNGIQLQLWTT 267
+ I++ +LE + D LLT + CY N IQ++L+ T
Sbjct: 1163 LKNNHIVELLLETLMDVFLLTIVRYTCYMNNIQIELYNT 1201
>UniRef50_Q4RKY8 Cluster: Chromosome 1 SCAF15025, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF15025, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1085
Score = 33.1 bits (72), Expect = 8.8
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 VERLRTYCFVIYFTQLF*FVCKLGVADCLALLLIFNKIIEVIH*NINMFEARLLRSSILK 180
V R T+ + QL V +G+ L L N I +H +I+ E R +++++
Sbjct: 36 VLRCPTFSVPPFVLQLLLLV-SIGLHRALLTGLTSNPHINDLHLDISGCELRSAGAAVIQ 94
Query: 181 KVLEAIKDLLTQATFDCYDNGIQLQLWTTLMCLSCH-SLSEL 303
++L + + AT D DNG+ L T L L+ H SL L
Sbjct: 95 ELLPRVVSI---ATLDISDNGLDADLLTVLPALARHPSLKHL 133
>UniRef50_A7MEN5 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 70
Score = 33.1 bits (72), Expect = 8.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 491 AYEFGSEHLGIPETEYSCTIR-MPSSEFARICRDL 592
A E GSEH +PE R M +FAR+CRD+
Sbjct: 7 ADEAGSEHALVPEAAMKFNFRDMTDEQFARLCRDI 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,832,041
Number of Sequences: 1657284
Number of extensions: 14340925
Number of successful extensions: 33036
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 31906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33020
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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