Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0376
         (831 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.9  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    23   8.6  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 531 LNTAALFACQVLNLLESAGISHS 599
           LN   +   +V+NLLESAG S+S
Sbjct: 111 LNKKVVPRSEVVNLLESAGFSNS 133


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 387  GDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLM 497
            G+ + +TI A+   DN  F+     Q K +DY + ++
Sbjct: 1717 GEDEQITILARHGEDNQLFLKAILGQYKQNDYNIDII 1753


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +3

Query: 276 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 428
           ++ S  L  + F  YRCDR++S   + G    +L  +   +++ + ++D +
Sbjct: 119 NIPSALLFNNNFSVYRCDRSLSGSSSRGG-GVLLAVSNAYESIELPSRDRS 168


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 646 SRQQATSAQRTSSWAQXASIDQE 714
           SRQ+AT A  TS+W   + + +E
Sbjct: 90  SRQRATRAPTTSTWTSKSVLCEE 112


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +3

Query: 297 RADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVS 476
           +++GFD Y     +++G+ +     +L+  G+  + T++   N D  TF   SP++ + S
Sbjct: 42  KSEGFDDYM----LALGVGM-----VLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRS 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,362
Number of Sequences: 2352
Number of extensions: 15951
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)